Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Phfumi.CG.MTP2014.S1...' > 
  2. Region 'REG00000788' > 
  3. Region 'REG00000570' > 
  4. Transcript 'Mooccu.CG.ELv1_2.S53...' > 
  5. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g71480.01.t

Possible name(s)

GRWD1; TBL1XR1; TBL1Y

Gene model

Boschl.CG.Botznik2013.chrUn.g71480

Location

chrUn [403,965,237 / 403,971,356]

Sequences

Amino acid sequence

Length: 187

>Boschl.CG.Botznik2013.chrUn.g71480.01.p
ADMMIELQCAKIGNKRIAATWSERNSVHLWDLSAQLAAVDNPAALQQFLRQEQKNASPVF
TFSGHLAEGFAMDWSPTGSLLTGDCGRNIHLWTQQNNGWHVDQRPFLAHTDSVEDIQWSP
NERSAKLSLEYILFTWKSLLLVILGKIFVIFPLLLLEYQRWLLRPSVTRYGICGKVLKRT
LNGDDLN

Nucleotide sequence

Length: 565

>Boschl.CG.Botznik2013.chrUn.g71480.01.t
GCTGATATGATGATTGAATTGCAGTGCGCGAAAATTGGTAACAAGAGAATAGCGGCGACT
TGGTCCGAGAGGAATTCGGTGCATTTGTGGGACCTCAGCGCGCAATTGGCGGCAGTCGAC
AATCCCGCGGCGTTGCAGCAGTTCCTCCGCCAGGAGCAAAAGAACGCTTCGCCCGTTTTC
ACGTTTTCCGGACACTTGGCAGAGGGCTTCGCGATGGACTGGTCGCCAACCGGCTCGTTG
CTTACCGGAGACTGCGGGAGGAATATTCATCTTTGGACGCAGCAGAACAACGGATGGCAT
GTCGACCAGCGTCCTTTTCTGGCGCACACGGACTCTGTGGAGGATATTCAATGGTCTCCT
AATGAACGTAGCGCCAAACTGAGTCTAGAATACATACTTTTTACTTGGAAATCGCTACTT
TTAGTTATACTTGGGAAGATATTTGTGATATTTCCTCTACTTCTACTTGAGTACCAACGA
TGGCTACTTAGACCGTCTGTTACTCGCTATGGGATTTGTGGTAAAGTTTTGAAGAGAACT
CTCAACGGGGATGACTTGAACTGAT

InterProScan

Gene3D
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[4-135] 1.8E-22
SUPERFAMILY
WD40_repeat_dom_sf (IPR036322) - T[16-123] 8.11E-13
SMART
WD40_repeat (IPR001680) - T[55-93] 0.0027

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
GRWD1_HUMAN 55.172 % 140 7.72E-40