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  1. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g67987.01.t

Possible name(s)

SRSF12; SRSF2; SRSF8

Gene model

Boschl.CG.Botznik2013.chrUn.g67987

Location

chrUn [388,182,835 / 388,183,145]

Sequences

Amino acid sequence

Length: 83

>Boschl.CG.Botznik2013.chrUn.g67987.01.p
MYSLKVDNLTYRTSPESLRRSFEEFGEVGDIYIPRDRYTKESRGFAFVRFFDKRDAEDAM
DGMDGKKLDGRELRVQTARYDVA

Nucleotide sequence

Length: 252

>Boschl.CG.Botznik2013.chrUn.g67987.01.t
AATGTATTCCTTAAAAGTCGATAATCTGACGTACCGAACGTCGCCAGAATCTTTGCGAAG
GTCTTTCGAGGAGTTTGGCGAGGTCGGTGACATATATATTCCCCGAGATAGATACACCAA
AGAAAGCCGCGGGTTCGCGTTCGTGCGATTTTTCGACAAGCGCGATGCAGAAGACGCAAT
GGATGGTATGGACGGGAAAAAGTTAGACGGGCGAGAGCTCCGTGTTCAAACGGCCAGGTA
TGATGTAGCATA

InterProScan

Gene3D
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[2-82] 6.4E-26
ProSiteProfiles
RRM_dom (IPR000504) - T[2-80] 19.451
SUPERFAMILY
RBD_domain_sf (IPR035979) - T[3-79] 2.15E-27
SMART
RRM_dom (IPR000504) - T[3-76] 7.8E-25
Pfam
RRM_dom (IPR000504) - T[5-74] 3.9E-23

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SRSF2_HUMAN 83.75 % 138 4.64E-43
SRSF8_HUMAN 72.5 % 123 2.29E-36
SRS12_HUMAN 46.835 % 72 6.71E-17