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- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g64230.01.t
Possible name(s)
FCN2; FCN3; TNXB
Gene model
Location
chrUn [371,151,244 / 371,153,532]
Amino acid sequence
Length: 184
>Boschl.CG.Botznik2013.chrUn.g64230.01.p
MDATPSFGATSFKSIVCQQCERWCDSADTISVDSPIRIGKAGATGSRGPPGPIGPIGRPG
AVGPSGIAGPVGPPGPEGVVNMTAIEELIDRRVELALGTNVGLENIGEVRSRLERGNWIV
FQRRMDGSLDFDRNWSDYRDGFGKTNGELWLGLEKLHQLTNSGSRELRIDMIARNGAHYT
AKYR
Nucleotide sequence
Length: 555
>Boschl.CG.Botznik2013.chrUn.g64230.01.t
TGGACGCTACTCCAAGTTTTGGGGCTACCTCGTTTAAATCGATAGTCTGCCAACAATGCG
AGCGCTGGTGCGATAGCGCGGACACTATCAGCGTTGACAGTCCGATTAGAATAGGAAAGG
CTGGAGCTACAGGAAGCCGTGGACCCCCCGGTCCGATTGGTCCAATAGGAAGACCAGGTG
CTGTCGGTCCCAGTGGTATTGCTGGACCGGTCGGACCACCGGGACCAGAAGGAGTCGTGA
ACATGACTGCTATCGAGGAGCTCATTGACAGAAGGGTCGAATTAGGTCTTGGAACAAACG
TTGGATTGGAAAATATCGGTGAAGTAAGATCGAGATTGGAACGAGGAAACTGGATTGTGT
TCCAGAGGAGAATGGACGGAAGCCTGGATTTCGATCGGAATTGGAGCGATTACAGGGACG
GATTTGGGAAGACAAATGGAGAATTGTGGCTTGGTCTGGAAAAGTTACACCAGCTCACTA
ATTCTGGAAGCCGCGAGTTGAGAATCGATATGATCGCAAGAAATGGAGCACATTATACTG
CAAAATACAGGTGAC
| Pfam |
Collagen (IPR008160) - T[39-78] 9.0E-7 |
| SMART |
Fibrinogen_a/b/g_C_dom (IPR002181) - T[86-184] 1.0E-4 |
| Gene3D |
Fibrinogen_a/b/g_C_1 (IPR014716) - T[109-184] 8.2E-30 |
| SUPERFAMILY |
Fibrinogen-like_C (IPR036056) - T[114-183] 3.4E-29 |
| Pfam |
Fibrinogen_a/b/g_C_dom (IPR002181) - T[115-183] 3.0E-23 |
| ProSiteProfiles |
Fibrinogen_a/b/g_C_dom (IPR002181) - T[116-184] 18.266 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FCN1_HUMAN | 38.323 % | 102 | 1.43E-26 |
| FCN2_HUMAN | 50.725 % | 80.9 | 1.48E-18 |
| FCN3_HUMAN | 55.714 % | 82 | 5.08E-19 |