Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g62583.01.t

Possible name(s)

MFSD6; MFSD6L

Gene model

Boschl.CG.Botznik2013.chrUn.g62583

Location

chrUn [363,776,580 / 363,780,501]

Sequences

Amino acid sequence

Length: 520

>Boschl.CG.Botznik2013.chrUn.g62583.01.p
MSASKESKRLRDCKIDTSLIPIKTLYFMYYGGLSSFIPYKSIYQKQLGMSTAQNGLIQAM
MQLVSLFSPPIAGLVTDKTKAYRMIIGSLFFFSVAFTIPFYFVPSEEAAYTTVNVDCCLP
AGELSRVVCDRNTSVDNHTICSTDMNTSVVMDSELYVECTGAHVNCTLPSENKDSYGVTF
ALLVAFTALMSFFLAPMTPLLDSSAMDTLGRDRVGSYGAQRLWGAVGFGIVGLGVGYLTD
VVSPVEIYGQYSKNYLVAFCSVVVFWVGALVVMVTSVKISAPKAKGILRGLKLLLVKIEI
LFFLFIVLVSGFATGVQYSYLFWYLQDFGDFGQSILGLSVLITCLSEIPMFWISGWICQT
FGYVSVLSIGLCAVSIRFFVYSVITNAWQILAVEWLHGISFALPMTAMCSYATVVAPKDA
VATLISFSQTVYWGIGNMLGALCGGLLYQHFGATVLFRVTAIICFSCAFLYWISLGPFGV
LGFCKLDKGREGVVEAGVDEKAECDQVYEEKLLKEEPAEV

Nucleotide sequence

Length: 1,563

>Boschl.CG.Botznik2013.chrUn.g62583.01.t
TGTCTGCAAGCAAAGAGAGTAAAAGACTGCGGGACTGCAAGATTGATACAAGCCTGATTC
CAATCAAAACACTGTATTTCATGTACTATGGAGGACTCTCAAGTTTCATTCCGTACAAGT
CAATATACCAGAAGCAACTTGGAATGAGTACAGCCCAGAACGGATTAATACAAGCAATGA
TGCAACTTGTTTCGCTGTTCTCCCCTCCCATCGCTGGATTAGTAACCGACAAGACAAAAG
CGTACAGAATGATCATCGGATCGTTGTTTTTCTTCTCGGTGGCATTCACGATTCCATTCT
ACTTCGTACCTTCCGAAGAAGCCGCATACACCACGGTTAATGTTGATTGCTGCTTGCCTG
CTGGAGAATTATCACGGGTCGTATGTGATCGAAATACTTCTGTGGACAATCATACCATCT
GTTCTACAGACATGAATACGTCGGTAGTGATGGATAGTGAACTGTATGTCGAGTGCACGG
GCGCACATGTAAACTGCACGTTACCTTCAGAGAACAAGGATAGCTATGGAGTAACATTTG
CACTTCTGGTAGCATTCACGGCGTTAATGTCATTTTTTCTGGCTCCAATGACACCACTGT
TAGACTCATCTGCCATGGACACACTGGGGAGGGACCGTGTGGGTAGTTACGGGGCTCAGA
GATTGTGGGGCGCTGTGGGATTCGGCATTGTTGGACTTGGTGTTGGCTATTTGACGGACG
TCGTCAGCCCGGTTGAGATTTACGGCCAATATTCGAAGAACTACCTTGTGGCGTTTTGCA
GCGTTGTCGTGTTTTGGGTTGGTGCTCTCGTCGTTATGGTAACATCGGTCAAAATTTCGG
CGCCAAAAGCAAAAGGAATTTTGCGTGGTTTGAAATTGCTGCTCGTAAAGATTGAGATAT
TGTTTTTCCTCTTCATCGTTCTCGTCAGTGGGTTTGCAACTGGGGTGCAATATTCGTACC
TGTTTTGGTACTTGCAAGATTTCGGCGATTTCGGACAGTCGATTCTGGGACTGTCTGTTC
TGATCACTTGCCTATCCGAAATTCCGATGTTTTGGATATCTGGATGGATTTGTCAGACGT
TTGGATACGTATCGGTGCTGTCTATTGGATTATGTGCAGTTTCTGTCCGCTTCTTCGTCT
ATTCCGTAATAACTAACGCGTGGCAAATCCTTGCTGTGGAATGGTTACACGGTATTTCTT
TCGCTTTGCCTATGACCGCAATGTGTTCGTATGCGACTGTCGTTGCACCGAAAGATGCAG
TGGCTACGTTGATTTCGTTCAGCCAAACCGTTTATTGGGGCATCGGTAACATGCTTGGTG
CGTTGTGTGGCGGTCTTCTCTATCAACACTTTGGAGCTACAGTGTTATTTCGAGTGACAG
CCATTATATGCTTCAGTTGTGCCTTTTTGTATTGGATCTCCCTCGGACCGTTCGGGGTGC
TGGGATTTTGCAAGTTGGATAAAGGCCGAGAAGGAGTTGTGGAAGCAGGTGTTGACGAAA
AAGCGGAATGCGATCAGGTTTACGAAGAAAAACTTTTGAAAGAAGAACCCGCAGAAGTTT
AAA

InterProScan

SUPERFAMILY	MFS_trans_sf (IPR036259) - T[19-103] 2.62E-45 - T[175-474] 2.62E-45
Pfam	MFS_assoc_dom (IPR024989) - T[20-459] 2.3E-79
CDD	MFS_dom (IPR020846) - T[25-473] 1.13453E-13
ProSiteProfiles	MFS_dom (IPR020846) - T[299-520] 9.314

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
MFSD6_HUMAN	23.297 %	126	9.56E-31