Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g62546.01.t

Possible name(s)

MYD88

Gene model

Boschl.CG.Botznik2013.chrUn.g62546

Location

chrUn [363,566,187 / 363,568,243]

Sequences

Amino acid sequence

Length: 242

>Boschl.CG.Botznik2013.chrUn.g62546.01.p
MSRQPQEVGVCDSTTGSRYSFETQNVSSVQQMHSTQSSHVPREHPDGQVKKELDSSWHPT
SPEPRAMNDMDRYGEKGPDSTYPYTSDTTSISLPAPPYTSIERSPSTHHVVTYLPACPQQ
VPQVAIEKLQPVMHKPLTILGYQTLYQMGLRLDPEMLPSLNWKMMAECMSFNNWEIKKFE
NEKSPTMAVIQAWARMGQHTIGELITILNKDLARLDVITDIPEYICTSSFILTAERSLID
TT

Nucleotide sequence

Length: 729

>Boschl.CG.Botznik2013.chrUn.g62546.01.t
AATGAGCCGCCAGCCGCAAGAGGTAGGGGTATGCGACAGTACAACGGGGTCAAGATATTC
ATTTGAAACACAAAATGTATCGAGCGTGCAGCAAATGCATAGCACGCAGAGCAGCCATGT
TCCAAGAGAACACCCGGACGGTCAAGTGAAAAAAGAGTTGGACAGCTCCTGGCATCCCAC
ATCTCCTGAGCCCAGAGCAATGAATGATATGGATCGATATGGAGAAAAAGGCCCAGACTC
CACATACCCTTACACTTCTGATACAACGTCCATATCATTGCCAGCACCTCCTTACACATC
CATAGAACGGAGCCCAAGTACGCATCATGTTGTGACGTATCTGCCCGCATGCCCTCAGCA
AGTGCCACAAGTGGCAATAGAAAAGTTACAGCCTGTCATGCATAAGCCGCTGACCATACT
CGGATACCAGACGCTTTATCAAATGGGACTCCGGTTGGATCCCGAAATGCTACCGTCGCT
GAATTGGAAGATGATGGCAGAGTGCATGAGTTTCAACAATTGGGAGATCAAAAAATTTGA
AAACGAGAAAAGTCCAACGATGGCCGTGATTCAAGCTTGGGCACGTATGGGCCAGCACAC
CATCGGCGAACTTATCACGATACTGAACAAGGATTTGGCGCGACTCGACGTAATCACTGA
CATCCCAGAATATATATGTACGTCGTCTTTTATTCTCACTGCAGAGCGCTCACTTATCGA
TACTACTTG

InterProScan

SUPERFAMILY	DEATH-like_dom_sf (IPR011029) - T[137-224] 2.43E-12
Pfam	Death_domain (IPR000488) - T[158-210] 1.5E-5
ProSiteProfiles	Death_domain (IPR000488) - T[161-210] 11.187

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value