- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g62004.01.t
Possible name(s)
AFG3L2; SPG7; YME1L1
Gene model
Location
chrUn [361,203,317 / 361,205,129]
Amino acid sequence
Length: 603
>Boschl.CG.Botznik2013.chrUn.g62004.01.p
MSFKDFVEEVLPTGEVVALNMNSYSGGHKARAMLRRGASFKGNSYPIPVLIEITDIKNAE
EFERIIRNAEKAMGLSPTEGIXIRHQLVSTGDAFAAVGLLLATVTLLILLISRAQSVMRS
SGGMASVSKLTPSSNIKKVETGIKFTDVAGCSEAKQEVMEFVHYLKHPEKYQKLGAKMPR
GCLLTGPPGVGKTLLAKAVASEAEVPFISKAGSDFVEMIGGLGAKRVRELFKEARSVAPC
IVYIDELDAVGAKRSSDNSQMSGASERDQTLNQILVEMDGILSTAHDVIVMASTNRVDML
DKALLRPGRFDRHISIDLPTKIERKDIFEIHMNKLKLKDPHSAYSDRLADLSPGMSGADI
ANICNEAAICAARDKDTHIDASHFEQAFERVLGGSKKKSSALSPDERKIVSVHEAGHTLV
GWMLKYTDTLVKVSIVPRTKSALGFSRTLQRETKMYTSRILMEIMATRLAGRSAENLVFG
TVTHGAEDDLKKVTDMAYMKVKEFGLNPVVGNLSFSKDEEEITKPYSDSLAQEIDIQVKN
TVIEAHQIAHDILVANRSKLDILSKELLEKEVLNYDDIKNLIGPPPYSNHGDKIMDDVPN
LNT
Nucleotide sequence
Length: 1,812
>Boschl.CG.Botznik2013.chrUn.g62004.01.t
AATGTCTTTCAAAGATTTTGTGGAAGAGGTGTTACCAACTGGTGAAGTGGTAGCGTTGAA
TATGAATTCATATTCAGGAGGGCACAAAGCCCGTGCTATGCTTCGACGTGGGGCTTCTTT
CAAGGGTAATTCTTACCCTATTCCTGTTTTGATCGAAATAACCGACATCAAAAATGCAGA
AGAGTTTGAGAGGATCATTCGTAATGCGGAAAAAGCAATGGGACTCAGTCCGACTGAAGG
AATACCNATCAGACATCAACTTGTCAGTACTGGTGATGCGTTCGCTGCGGTGGGATTACT
ATTGGCCACTGTGACATTGTTGATATTGTTAATATCACGTGCGCAATCTGTTATGCGCAG
TTCAGGTGGGATGGCGTCTGTCAGTAAGCTAACGCCAAGTAGTAACATAAAGAAAGTGGA
GACGGGCATCAAATTCACAGATGTTGCAGGGTGTTCTGAAGCAAAACAAGAGGTAATGGA
ATTCGTCCACTATTTAAAGCATCCTGAGAAATACCAAAAACTAGGTGCTAAAATGCCGAG
AGGTTGTCTTCTCACAGGCCCACCCGGTGTCGGTAAAACCTTACTAGCTAAAGCAGTTGC
TAGTGAGGCAGAAGTTCCGTTCATATCAAAGGCCGGTTCTGACTTTGTTGAAATGATTGG
TGGGCTCGGTGCAAAAAGAGTGCGTGAGCTGTTTAAAGAAGCACGCTCGGTAGCGCCGTG
CATTGTGTACATTGACGAGTTAGATGCCGTTGGTGCCAAAAGGTCTTCCGATAATTCTCA
AATGTCAGGCGCCTCTGAACGGGATCAAACTTTGAATCAAATTCTAGTCGAAATGGACGG
TATTTTGAGTACGGCTCATGATGTAATTGTTATGGCGTCAACGAATCGTGTTGATATGTT
AGATAAAGCTCTTTTGAGACCCGGTCGATTCGACAGGCATATTTCAATCGATTTACCGAC
TAAAATTGAAAGAAAAGACATTTTTGAGATACACATGAACAAACTGAAATTGAAAGATCC
ACACTCTGCTTACTCTGATCGCTTAGCGGATTTATCTCCAGGCATGAGTGGCGCCGACAT
CGCAAATATCTGTAATGAAGCCGCGATCTGTGCAGCCCGAGATAAAGACACTCACATCGA
CGCCAGTCACTTTGAACAAGCCTTCGAACGAGTGCTGGGCGGATCCAAGAAAAAATCATC
CGCCCTTTCCCCGGACGAGCGAAAAATAGTTTCGGTTCACGAAGCCGGGCATACTCTCGT
CGGTTGGATGCTAAAGTACACGGACACGCTCGTTAAAGTTTCGATAGTCCCGAGGACCAA
GTCTGCGTTGGGTTTTAGCAGGACGTTACAGCGCGAAACGAAAATGTACACAAGTCGGAT
TTTGATGGAAATCATGGCAACGAGATTGGCGGGAAGGTCGGCCGAGAATCTAGTGTTCGG
TACGGTGACGCACGGGGCCGAAGACGACTTGAAAAAAGTCACGGACATGGCGTATATGAA
AGTGAAGGAGTTTGGACTCAATCCTGTTGTCGGAAATTTATCGTTTTCAAAAGACGAGGA
AGAGATAACGAAGCCGTACAGCGACTCGCTGGCGCAAGAGATCGATATTCAAGTCAAAAA
TACCGTAATCGAAGCTCACCAAATTGCGCACGACATACTAGTTGCTAACCGATCGAAATT
AGATATATTATCCAAAGAACTGCTTGAGAAAGAAGTGTTGAACTACGACGATATCAAAAA
TCTTATTGGCCCCCCTCCATACAGTAATCATGGTGATAAAATTATGGATGATGTTCCCAA
TTTAAATACTTG
| TIGRFAM |
FtsH (IPR005936) - T[103-582] 3.7E-169 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[143-414] 4.51E-61 |
| SMART |
AAA+_ATPase (IPR003593) - T[178-320] 1.1E-17 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[183-317] 2.2E-38 |
| Pfam |
Peptidase_M41 (IPR000642) - T[381-581] 4.0E-56 |
| SUPERFAMILY |
Peptidase_M41-like (IPR037219) - T[402-588] 2.62E-50 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPG7_HUMAN | 48.756 % | 540 | 0 |
| AFG32_HUMAN | 42.546 % | 470 | 3.35E-157 |
| YMEL1_HUMAN | 37.045 % | 277 | 1.61E-83 |