- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g61871.01.t
Possible name(s)
TUBB; TUBB2B; TUBB4B
Gene model
Location
chrUn [360,730,785 / 360,732,481]
Amino acid sequence
Length: 447
>Boschl.CG.Botznik2013.chrUn.g61871.01.p
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGVYHGDSDLQLERINVYYNEASGGKYV
PRAVLVDLEPGTMDAVRSGPFGQLFRPDSFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RREAEGCDCLQGFQLTQSLGGGTGSGMGTLLISKIREEYPDRIMMTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRILSVPELTQQMFDAKNMM
AACDPRHGRYLTVAAMFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATADEEGEFESEGEGEVDED
Nucleotide sequence
Length: 1,344
>Boschl.CG.Botznik2013.chrUn.g61871.01.t
TATGAGAGAAATCGTCCATCTGCAAGCCGGCCAATGCGGTAATCAAATCGGAGCCAAGTT
CTGGGAAGTAATTTCCGATGAACACGGTATCGACCCAACTGGTGTATATCATGGCGACAG
CGACCTACAGCTGGAACGAATCAACGTATACTACAATGAAGCGTCAGGTGGAAAATATGT
ACCAAGAGCCGTGTTGGTAGATCTTGAACCAGGAACTATGGATGCGGTAAGGTCCGGGCC
GTTCGGACAGTTGTTCAGACCAGACAGCTTCGTGTTCGGTCAAAGCGGAGCGGGAAATAA
CTGGGCTAAAGGACATTACACAGAAGGGGCCGAACTTGTAGATTCGGTGCTTGACGTGGT
CAGGCGAGAAGCGGAAGGGTGTGACTGTTTACAAGGATTCCAATTGACCCAATCCCTCGG
CGGCGGTACTGGTTCTGGAATGGGCACGCTTTTGATCAGCAAGATCCGAGAGGAGTATCC
CGATAGAATCATGATGACATTCAGCGTCGTCCCATCTCCAAAAGTTTCGGACACTGTCGT
AGAACCCTACAACGCCACCCTTTCAGTTCATCAGCTCGTAGAGAACACCGACGAAACATA
CTGCATCGACAACGAAGCTTTATACGATATCTGCTTCCGTACTTTGAAGTTGACCACCCC
GACTTATGGAGATTTAAACCATCTGGTATCCGCCACGATGAGTGGAGTCACTACGTGCCT
CCGATTCCCCGGTCAGTTGAACGCGGATTTGCGTAAATTGGCCGTTAACATGGTTCCATT
CCCCCGATTGCACTTCTTCATGCCTGGCTTCGCCCCGCTCACGAGTCGCGGCAGTCAGCA
GTACCGCATCCTCAGTGTTCCCGAGCTCACCCAGCAGATGTTCGATGCTAAGAATATGAT
GGCCGCTTGCGACCCGCGCCACGGACGATACCTGACTGTGGCGGCTATGTTCCGTGGCCG
GATGTCGATGAAGGAAGTCGACGAGCAAATGCTGAACATACAAAACAAGAACAGCTCCTA
CTTCGTCGAATGGATTCCAAACAATGTCAAGACCGCTGTCTGTGATATTCCACCGCGCGG
ACTCAAGATGGCCGCGACTTTCGTAGGCAACAGCACCGCCATTCAGGAACTATTCAAAAG
AATTTCCGAGCAGTTCACGGCTATGTTCCGCCGAAAGGCTTTCTTGCATTGGTACACTGG
CGAAGGTATGGATGAGATGGAGTTCACTGAGGCCGAGAGCAACATGAACGACTTGGTGAG
CGAGTACCAACAGTATCAAGACGCTACCGCCGACGAGGAAGGTGAATTCGAGTCCGAAGG
AGAGGGAGAAGTCGATGAAGATTA
| SUPERFAMILY |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-243] 9.55E-102 |
| Gene3D |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-263] 9.6E-127 |
| ProSitePatterns |
Beta-tubulin_BS (IPR013838) - T[1-4] . |
| Pfam |
Tubulin_FtsZ_GTPase (IPR003008) - T[3-211] 8.5E-68 |
| PRINTS |
Tubulin (IPR000217) - T[10-30] 2.7E-104 - T[51-70] 2.7E-104 - T[93-104] 2.7E-104 - T[106-130] 2.7E-104 - T[132-150] 2.7E-104 - T[151-172] 2.7E-104 - T[176-189] 2.7E-104 - T[190-210] 2.7E-104 - T[370-398] 2.7E-104 |
| PANTHER |
Tubulin (IPR000217) - T[12-443] 0.0 |
| PANTHER |
Beta_tubulin (IPR002453) - T[12-443] 0.0 |
| PRINTS |
Beta_tubulin (IPR002453) - T[41-58] 5.0E-123 - T[88-99] 5.0E-123 - T[108-126] 5.0E-123 - T[152-164] 5.0E-123 - T[212-224] 5.0E-123 - T[230-239] 5.0E-123 - T[245-258] 5.0E-123 - T[265-281] 5.0E-123 - T[311-329] 5.0E-123 - T[329-343] 5.0E-123 - T[347-370] 5.0E-123 - T[377-388] 5.0E-123 - T[412-430] 5.0E-123 |
| SMART |
Tubulin_FtsZ_GTPase (IPR003008) - T[47-244] 2.0E-69 |
| ProSitePatterns |
Tubulin_CS (IPR017975) - T[140-146] . |
| SUPERFAMILY |
Tub_FtsZ_C (IPR008280) - T[244-429] 1.07E-83 |
| SMART |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[246-383] 7.8E-50 |
| Pfam |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[261-381] 4.7E-42 |
| Gene3D |
Tubulin/FtsZ_C_sf (IPR037103) - T[264-373] 9.1E-57 |
| Gene3D |
Tubulin_C (IPR023123) - T[374-444] 1.7E-36 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBB4B_HUMAN | 96.487 % | 848 | 0 |
| TBB2B_HUMAN | 95.116 % | 847 | 0 |
| TBB5_HUMAN | 95.338 % | 845 | 0 |
