- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g58837.01.t
Possible name(s)
MALRD1; MAMDC2
Gene model
Location
chrUn [347,448,724 / 347,458,360]
Amino acid sequence
Length: 527
>Boschl.CG.Botznik2013.chrUn.g58837.01.p
TGSGYYIYIETSVPRKNGDHARLISPTLWESGPFCFRFWHNMHGTDVKDLNIKIKGEESG
LETTIAHLSGPWSVGTNSRSVAGENTDWWNQESIDLDVNEPINIIIEGISGKNYKGDIAI
DDIELKEGNCPRQSPYCDFENNTCGWTQMTEDEFNWLPNRGRTQTLKTGPMNDHTLKTAQ
GRYLYIETSWPRVEGDIARLLSPKIECDEGAKPIFNFWYNMNGAHTGPLKVFVTNDKVRL
GDALWEKTGDQGSQWILGQVLIPADVLDKGPFHVIVEAERKNFEGDIAIDDLSVGACSAS
DEDARFPNTIITTTASTTTLELVTVPQMKLFDDGPALLPDNINCAFERGNLCGWKQDVKD
DVDWEIFQKRTPSSGTGPSSDHTTGHGWFIYLEASSAKNKQYSTILSPAINQKFQTCVSF
FYHMKGKSMGMLEVMSVQSGGTKFTREWMKDTEQSRNDTDWRFAQVTIKESMPYQIAFRA
TRGSGFQSDIALDDIKVEGRPCDDEKPKNDDTVVKPTLAGKNDGISI
Nucleotide sequence
Length: 1,586
>Boschl.CG.Botznik2013.chrUn.g58837.01.t
GACTGGTTCTGGATATTACATTTACATAGAAACTTCCGTACCAAGAAAGAATGGCGATCA
CGCCAGACTTATCAGTCCGACATTATGGGAGAGCGGTCCATTTTGTTTCAGGTTTTGGCA
CAACATGCACGGTACTGATGTGAAAGACTTGAATATCAAAATCAAAGGCGAGGAATCAGG
TCTAGAGACGACCATAGCGCATTTATCCGGACCATGGTCGGTTGGCACCAACAGTAGATC
CGTGGCAGGCGAGAACACGGACTGGTGGAATCAAGAATCGATTGACTTAGACGTAAACGA
ACCCATTAACGTTATCATTGAGGGGATATCGGGCAAAAACTACAAAGGCGATATCGCCAT
TGACGACATCGAACTGAAAGAAGGAAATTGCCCTCGACGGTCGCCATACTGCGATTTTGA
AAACAACACTTGCGGCTGGACCCAAATGACTGAAGACGAATTCAATTGGTTGCCGAACAG
AGGAAGAACTCAAACACTGAAGACTGGGCCCATGAATGACCACACTTTGAAAACAGCGCG
AGGAAGATATCTCTACATCGAAACTTCATGGCCCAGAGTGGAAGGAGATATAGCGAGATT
GTTATCTCCCAAAATAGAGTGCGACGAAGGAGCCAAGCCGATTTTCAATTTCTGGTACAA
CATGAACGGTGCACATACCGGGCCCTTGAAGGTTTTCGTCACCAACGACAAAGTTCGATT
GGGTGACGCGCTTTGGGAAAAAACAGGCGATCAAGGAAGTCAATGGATTCTCGGACAAGT
TCTGATCCCCGCAGATGTGTTAGACAAAGGACCCTTTCACGTGATTGTTGAAGCGGAACG
TAAAAACTTCGAAGGTGATATAGCAATCGATGACCTCAGTGTCGGGGCATGCTCAGCCAG
CGACGAAGACGCCCGATTTCCAAACACAATCATAACTACAACGGCATCGACTACCACGTT
GGAATTGGTTACCGTGCCGCAGATGAAGCTGTTCGATGATGGACCAGCATTGTTACCAGG
TAACATCAACTGTGCCTTTGAGCGGGGCAATTTATGCGGATGGAAGCAAGATGTTAAAGA
CGATGTAGATTGGGAGATATTTCAAAAGCGAACTCCAAGCTCTGGTACAGGCCCTTCGTC
TGATCACACAACAGGGCGCGGCTGGTTTATCTACTTGGAAGCGTCATCTGCAAAAAACAA
GCAATACAGCACGATTCTCAGTCCAGCAATCAACCAAAAATTTCAAACCTGTGTTAGTTT
TTTCTACCACATGAAAGGGAAAAGCATGGGGATGCTGGAAGTCATGTCGGTCCAAAGTGG
TGGTACGAAGTTTACTCGCGAATGGATGAAAGATACGGAACAAAGCAGAAACGACACCGA
CTGGAGATTTGCCCAGGTCACGATCAAAGAATCAATGCCTTATCAAATCGCGTTTCGCGC
CACTCGCGGTTCAGGCTTCCAATCAGACATAGCCTTGGACGACATTAAAGTTGAAGGCCG
ACCGTGCGGTGATGAAAAGCCAAAGAATGATGACACGGTCGTTAAACCAACGCTTGCAGG
TAAAAACGATGGGATATCTATTTAAT
| ProSiteProfiles |
MAM_dom (IPR000998) - T[1-132] 19.883 - T[135-299] 29.7 - T[342-504] 33.151 |
| SMART |
MAM_dom (IPR000998) - T[1-132] 3.4E-5 - T[133-299] 7.0E-28 - T[339-504] 2.5E-34 |
| SUPERFAMILY |
ConA-like_dom_sf (IPR013320) - T[1-130] 3.64E-23 - T[135-296] 2.85E-37 - T[341-502] 3.64E-39 |
| CDD |
MAM_dom (IPR000998) - T[1-130] 1.10411E-28 - T[137-297] 8.07422E-43 - T[344-502] 1.04809E-41 |
| Pfam |
MAM_dom (IPR000998) - T[2-131] 1.8E-22 - T[137-297] 1.0E-33 - T[344-502] 5.3E-40 |
| PRINTS |
MAM_dom (IPR000998) - T[350-368] 7.8E-6 - T[416-427] 7.8E-6 - T[466-480] 7.8E-6 - T[485-498] 7.8E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| AEGP_HUMAN | 24.861 % | 118 | 5.49E-28 |
| MAMC2_HUMAN | 24.225 % | 144 | 7.5E-37 |
| MALR1_HUMAN | 28.853 % | 186 | 1.76E-50 |
