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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.L37.39.v2....' > 
  2. Transcript 'KH2012:KH.C5.298.v6....' > 
  3. Transcript 'Cisavi.CG.ENS81.R16....' > 
  4. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g58495.01.t

Possible name(s)

TRMT12; TRMT5

Gene model

Boschl.CG.Botznik2013.chrUn.g58495

Location

chrUn [345,712,322 / 345,717,637]

Sequences

Amino acid sequence

Length: 375

>Boschl.CG.Botznik2013.chrUn.g58495.01.p
MAGLENAVVVKRNEDVFKPPEAVRGMKVLDRDAFTKSIKLPAMLVPSRSLQRFCKLFKKD
RLTSRYASTTPSPEDKRYVAMVPEFDLEKVDHLKMEELKELNVEQKLHEITMDIRYEHYK
HFEILAAIMPNGVTPNSGFERVGHIVHVNLLEEQKPFKRVIGQVILDTQKTARTVVDKAC
TIDNTYRNFKMDVIAGEEDFITTVIEHGRRFQFDYSKVFWNSRLETEHMRIIDLITKGSI
VFDVFAGVGPFSIPLAKKGCQVYANDLNSESYKWLCHNAKLNKTQLNAFNLDGREFIESE
LSKFVRTAPKESKIFVIMNLPGHAVDFLDAFPGLLSTEITNREDNEMPDINIFCYTFSAA
EDKIRKYKNKMPLDQ

Nucleotide sequence

Length: 1,128

>Boschl.CG.Botznik2013.chrUn.g58495.01.t
AATGGCTGGCTTGGAGAATGCTGTCGTGGTGAAGAGGAACGAAGACGTCTTCAAGCCTCC
TGAGGCAGTGCGGGGAATGAAAGTGCTGGATAGAGACGCATTCACAAAAAGTATCAAGCT
ACCTGCGATGCTGGTACCAAGTCGATCTTTACAGCGATTTTGCAAGTTATTCAAGAAAGA
TCGCCTAACCTCAAGATATGCGTCAACCACGCCGTCGCCGGAAGACAAGCGATATGTGGC
TATGGTTCCGGAATTTGATTTGGAAAAGGTCGATCATCTGAAAATGGAGGAATTGAAGGA
ACTCAATGTCGAACAAAAATTACATGAAATCACGATGGATATTAGGTATGAACATTACAA
GCACTTTGAAATTCTCGCTGCAATCATGCCGAACGGTGTCACCCCGAATTCGGGCTTTGA
GAGAGTCGGTCACATCGTTCATGTCAATCTTTTGGAAGAACAGAAGCCCTTCAAGCGTGT
CATCGGCCAGGTAATCTTGGACACACAAAAGACAGCAAGAACTGTGGTAGACAAGGCGTG
CACTATCGACAACACTTACAGAAATTTCAAAATGGATGTCATTGCGGGTGAAGAGGATTT
TATAACCACTGTAATAGAGCACGGTCGCAGATTTCAATTTGACTATTCTAAGGTTTTTTG
GAATTCAAGACTGGAAACTGAACACATGCGTATTATTGATCTAATAACAAAGGGTTCTAT
AGTTTTTGATGTTTTTGCCGGTGTCGGACCCTTTTCGATACCGTTAGCAAAGAAAGGCTG
TCAGGTTTACGCCAATGACTTGAATAGCGAATCGTACAAGTGGCTTTGTCATAACGCCAA
ATTGAACAAAACTCAACTCAACGCATTCAACCTTGATGGCAGGGAATTCATTGAGAGCGA
ATTGAGTAAATTTGTTAGGACGGCTCCGAAGGAATCGAAAATATTTGTGATTATGAATTT
GCCGGGACACGCTGTGGATTTTTTGGATGCTTTTCCAGGCCTTCTATCGACAGAAAGAAC
GAATCGAGAGGACAACGAAATGCCTGATATTAACATATTTTGCTATACGTTTTCCGCTGC
AGAGGATAAGATACGTAAGTATAAGAATAAGATGCCACTAGATCAGTG

InterProScan

Hamap
tRNA_Gua_MeTrfase_euk (IPR025792) - T[26-373] 20.305
SUPERFAMILY
SAM-dependent_MTases (IPR029063) - T[137-338] 9.3E-51
Pfam
MeTrfase_TRM5/TYW2 (IPR030382) - T[138-331] 8.8E-58
ProSiteProfiles
MeTrfase_TRM5/TYW2 (IPR030382) - T[139-375] 85.359

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TRM5_HUMAN 41.292 % 280 2.01E-90