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  1. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g57942.01.t

Possible name(s)

NECTIN3; NECTIN4; PXDN

Location

chrUn [342,338,040 / 342,339,084]

Sequences

Amino acid sequence

Length: 347

>Boschl.CG.Botznik2013.chrUn.g57942.01.p
MFSMLCIXSNFTGNYVELSITTGSGSDXIIAKHDTVNGNEAEILVXTYNGRLNFIKSNVV
ISDVQISDDGLYRCTDKGIDGSEIKLETEXQVLVRPKITVGLTNTPLKSGSSLMKAAECK
ASDAWPPAQVRWTSDRHLDFNVTKVENSGNYPXVYNTTAALYILPTNFFDKQPFICTVIH
XXLEMGANSTTIYLNVQYSPSKPIIEVINQSTLVRCKADGNPTPXITWTILAXSPVVRPA
SGESVIRLISPHKSVHHNDTYIICHAKNGIKPDTSXNITASEAIPQYKVLGHADDWMFRG
IVIGVNLILALLFFGLFVWSMNRKKDKKKIASETKGDVCEPSQDSQI

Nucleotide sequence

Length: 1,044

>Boschl.CG.Botznik2013.chrUn.g57942.01.t
AATGTTCTCAATGTTGTGCATCNATTCAAATTTCACAGGAAACTATGTCGAGCTTAGCAT
CACCACTGGAAGCGGATCTGATNATATTATTGCAAAACATGACACCGTAAACGGTAATGA
AGCAGAAATACTTGTTTCNACTTACAATGGACGGTTGAATTTCATCAAAAGTAACGTAGT
TATTAGCGATGTTCAAATAAGTGACGACGGACTGTACCGTTGTACTGATAAAGGAATTGA
TGGCAGCGAGATAAAACTGGAAACAGAANTGCAAGTCCTGGTACGTCCCAAGATTACAGT
TGGTCTCACGAATACGCCGCTTAAATCTGGTAGCAGCTTGATGAAAGCTGCTGAATGTAA
AGCCTCTGATGCTTGGCCACCTGCCCAAGTGAGATGGACCAGCGATCGCCATCTCGATTT
TAACGTCACCAAAGTAGAAAACTCAGGGAATTATCCCNCAGTCTATAACACGACAGCTGC
TTTGTATATCCTTCCAACCAATTTTTTTGACAAGCAACCGTTCATATGCACTGTCATACA
TCNNTCNTTAGAGATGGGCGCTAATTCAACGACAATATACCTTAATGTGCAGTACTCCCC
GTCGAAACCGATAATCGAGGTCATCAACCAAAGTACCCTGGTCCGATGCAAGGCCGACGG
CAATCCAACACCGGNAATTACTTGGACCATTCTTGCTGGNAGTCCTGTGGTGCGACCAGC
CAGCGGCGAAAGCGTGATACGACTCATATCTCCGCATAAGTCTGTTCATCACAATGACAC
GTATATAATATGCCATGCAAAGAATGGAATCAAACCAGATACGAGTGTNAATATAACAGC
ATCCGAGGCGATTCCACAGTATAAAGTTCTTGGCCATGCTGACGACTGGATGTTTAGAGG
GATTGTTATTGGCGTTAACCTGATTCTTGCCCTGTTATTTTTTGGGCTTTTCGTCTGGAG
TATGAATCGAAAAAAAGATAAGAAGAAAATCGCAAGCGAGACCAAAGGCGACGTGTGTGA
ACCATCGCAAGATTCACAAATCTA

InterProScan

SUPERFAMILY
Ig-like_dom_sf (IPR036179) - T[44-81] 1.33E-5 - T[118-200] 5.94E-8 - T[202-229] 1.33E-5
PANTHER
Nectin-2 (IPR033318) - T[49-335] 2.9E-25
Gene3D
Ig-like_fold (IPR013783) - T[94-200] 7.9E-11 - T[201-280] 1.4E-5
ProSiteProfiles
Ig-like_dom (IPR007110) - T[96-195] 10.608

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value