- Transcript 'KH2012:KH.C2.714.v2....' >
- Clone 'cijv412p12' >
- Transcript 'KH2012:KH.C1.330.v2....' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g53476.01.t
Possible name(s)
TBL1X; TBL1XR1; TBL1Y
Gene model
Location
chrUn [326,131,221 / 326,138,190]
Amino acid sequence
Length: 377
>Boschl.CG.Botznik2013.chrUn.g53476.01.p
MEVDPSMNDVGLPVTKATVLRGHDSEVFICAWNPTCDLLASGSGDSTARIWNLKEDVPSS
GGAAMGQQLVLRHCIKEGNQEVPSNKDVTSLDWNCNGTLLATGSYDGYARIWSTDGQLAN
LLGQHKGPIFALKWNKEGNYILSAGVDKTTIIWDALSGESKQQFPFHQAPALDVDWQNDT
CFASCSTDMSIHVCRLGCDKPVKTFKGHSNEVNAIKWDPSGRLLASCSDDMTLKVWSMKQ
DTYVHDLRAHNKEIYTIKWSPAGVGSPNPNQNLLLASASFDSTVRLWESERGTCLHTLTR
HQEPVYSVAFSPDGRLLASGSFDKCVHIWNTQEISLRTFEAKDFYFAFLLRNNEMLRFWP
GPALAAGVLVYFRVALG
Nucleotide sequence
Length: 1,134
>Boschl.CG.Botznik2013.chrUn.g53476.01.t
AATGGAAGTCGATCCTTCGATGAACGACGTTGGTTTGCCGGTAACGAAAGCAACCGTTTT
ACGAGGGCACGATTCCGAAGTTTTCATTTGCGCTTGGAATCCCACCTGTGATTTACTAGC
ATCCGGTTCGGGGGACTCTACTGCTCGCATATGGAACTTGAAGGAAGATGTGCCGTCGTC
TGGCGGTGCAGCTATGGGGCAACAACTCGTTTTACGGCATTGTATAAAAGAAGGCAATCA
GGAGGTTCCAAGCAATAAAGACGTTACTTCACTCGACTGGAAGTGTAACGGGACATTATT
AGCAACGGGATCCTACGATGGTTATGCAAGAATATGGTCGACTGACGGACAATTGGCCAA
TTTACTCGGTCAACACAAGGGTCCGATCTTTGCCTTGAAATGGAACAAAGAAGGAAACTA
CATTTTAAGCGCGGGCGTTGATAAGACAACGATAATTTGGGATGCTCTGTCGGGAGAATC
GAAACAACAGTTTCCATTTCATCAAGCTCCGGCTCTTGATGTTGATTGGCAAAACGATAC
CTGTTTCGCGTCGTGTTCCACCGATATGAGCATACACGTTTGTAGGTTAGGGTGCGATAA
ACCTGTGAAAACCTTTAAAGGACATTCGAATGAAGTAAACGCGATAAAATGGGACCCGTC
AGGACGTCTTCTAGCGTCATGTTCAGACGATATGACGTTAAAGGTTTGGTCTATGAAACA
AGATACATACGTTCACGATCTCCGGGCGCATAACAAAGAGATTTACACCATAAAATGGAG
TCCGGCCGGAGTCGGCTCACCGAATCCCAATCAGAATTTGTTACTTGCCAGCGCTTCTTT
CGATTCGACCGTGCGACTCTGGGAGTCGGAACGCGGCACGTGTCTGCACACGTTGACCAG
GCATCAGGAACCGGTCTATTCCGTCGCTTTCAGCCCCGACGGGCGATTACTTGCCAGCGG
CTCTTTTGATAAATGCGTCCATATCTGGAACACACAGGAAATTTCTCTCCGCACGTTTGA
AGCAAAAGATTTCTATTTCGCGTTTTTGCTTCGAAACAATGAAATGCTTCGTTTTTGGCC
GGGGCCCGCGTTGGCCGCTGGCGTTCTTGTGTATTTTCGGGTGGCGCTCGGATG
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[8-350] 2.8E-143 |
| SMART |
WD40_repeat (IPR001680) - T[13-52] 6.1E-8 - T[68-113] 4.6E-5 - T[115-154] 2.7E-6 - T[157-195] 0.011 - T[198-237] 1.1E-11 - T[240-288] 3.8E-7 - T[291-330] 2.9E-13 |
| Pfam |
WD40_repeat (IPR001680) - T[18-52] 1.6E-5 - T[85-113] 1.7E-5 - T[122-154] 7.2E-4 - T[200-237] 1.7E-10 - T[244-287] 0.0011 - T[292-330] 1.3E-10 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[18-332] 1.22E-75 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[20-339] 51.385 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[20-54] 14.118 - T[88-113] 10.174 - T[122-163] 13.148 - T[205-246] 16.29 - T[247-297] 10.976 - T[298-330] 15.321 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[39-53] . - T[141-155] . - T[275-289] . - T[317-331] . |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[39-53] 5.8E-7 - T[275-289] 5.8E-7 - T[317-331] 5.8E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBL1R_HUMAN | 78.274 % | 551 | 0 |
| TBL1X_HUMAN | 78.869 % | 561 | 0 |
| TBL1Y_HUMAN | 77.381 % | 545 | 0 |