- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.C12.677.v2...' >
- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'Phfumi.CG.MTP2014.S8...' >
- Transcript 'Harore.CG.MTP2014.S9...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S9.g13346.01.t
Possible name(s)
MKRN1; MKRN2; MKRN3
Gene model
Location
S9 [325,108 / 327,719]
Amino acid sequence
Length: 407
>Harore.CG.MTP2014.S9.g13346.01.p
MRVTRYERPEIDTHTTEPSVFDRNLVGCETFAFWCARNKEKATTCNTMAQRNDTKATCSG
YNRGMSSSALDVSWADAAEFVPGRQYMPRVTSSYSNITKKSIPAESTNEISDTSTLLCPY
YMVGNCRYGEDCLYIHGTMCDMCGLNILHPTDILQETKHKEECLNSHEEDMKESFSIAQS
SEITCGICMDQVWQKGQRKFGILENCSHAFCLDCIRKWRCAKSFNNTVVKACPQCRVPSS
FVTPSETWVEDPEEKKRLISGYKKHLSSKACKHFSEGKGKCPFGVNCFYRHSYPNGELQD
RTKIPKRVRNADGEQEIYESALLWDFFLDRDSNVDLDLEDDLDFCDIVYLLGQNSSLDDE
DDCLALINILCHLFQSYYNGSISKVLYSTVFLYSSARFYSSIHTSLG
Nucleotide sequence
Length: 1,358
>Harore.CG.MTP2014.S9.g13346.01.t
ATGCGGGTCACTCGTTACGAACGACCTGAAATAGATACACATACGACCGAACCGTCAGTT
TTTGATCGTAACTTAGTTGGCTGCGAAACATTTGCTTTCTGGTGTGCCAGAAACAAAGAA
AAAGCGACGACTTGCAATACCATGGCGCAACGCAATGATACAAAAGCGACGTGCAGTGGA
TACAACCGCGGGATGAGTTCGAGCGCCCTCGACGTGAGCTGGGCAGACGCTGCTGAGTTT
GTACCAGGAAGGCAATATATGCCAAGAGTAACATCTTCCTACAGCAATATAACAAAGAAA
TCAATACCTGCAGAATCCACTAATGAAATTTCTGACACTTCCACTCTACTGTGTCCATAT
TACATGGTTGGAAATTGCAGATATGGAGAAGATTGCTTGTACATCCATGGAACAATGTGT
GACATGTGTGGGCTCAACATCCTGCATCCGACTGACATTTTGCAAGAAACGAAACATAAA
GAGGAGTGTTTGAATAGCCATGAGGAAGACATGAAGGAGTCCTTTAGTATTGCTCAAAGC
AGTGAAATTACCTGTGGAATATGCATGGACCAGGTGTGGCAGAAAGGGCAGCGAAAGTTT
GGCATACTCGAAAACTGTAGCCACGCTTTTTGCCTCGACTGCATACGCAAGTGGAGATGT
GCAAAAAGTTTCAATAATACAGTTGTCAAAGCCTGCCCACAGTGCCGGGTACCGTCTTCG
TTTGTTACGCCGAGCGAAACCTGGGTCGAAGATCCTGAAGAAAAAAAGAGATTAATATCT
GGATACAAAAAACATCTATCTTCAAAAGCTTGCAAGCACTTCAGTGAAGGCAAAGGAAAA
TGCCCATTCGGAGTGAACTGCTTTTATCGACATTCTTACCCCAACGGGGAACTCCAAGAT
CGAACCAAAATACCGAAGAGGGTTAGAAATGCTGACGGCGAACAGGAGATTTATGAATCT
GCTCTTCTCTGGGATTTCTTCCTCGACCGAGACAGCAATGTAGATTTAGACTTGGAAGAC
GATCTGGACTTTTGCGACATCGTGTACTTGCTTGGTCAGAATTCCAGTTTGGATGACGAA
GATGACTGCCTCGCACTCATTAACATACTATGCCACTTATTCCAATCGTATTATAATGGA
TCAATATCGAAAGTGTTGTATTCTACTGTATTTCTCTATTCAAGCGCCAGATTTTACTCT
TCAATTCACACTTCATTAGGCTAATGTAACATGTTTTTTTGTCTATGTTAAAATATTTTT
AAAATTATGAGTGTTGTTTTATCTGTGATGATTACTTTTAAGCATTTTAAGAATTCCTGC
TATTGTTGTAAAATTGAATAAAAAAGCTGGTGATTTTA
| ProSiteProfiles |
Znf_CCCH (IPR000571) - T[112-139] 14.126 - T[266-294] 14.183 |
| SMART |
Znf_CCCH (IPR000571) - T[112-138] 2.3E-5 - T[267-293] 0.046 |
| SUPERFAMILY |
Znf_CCCH_sf (IPR036855) - T[113-137] 4.97E-6 |
| Pfam |
Znf_CCCH (IPR000571) - T[116-137] 3.3E-6 |
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[159-266] 4.1E-11 |
| Pfam |
Znf_RING (IPR001841) - T[184-236] 2.1E-6 |
| SMART |
Znf_RING (IPR001841) - T[185-235] 6.1E-6 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[185-236] 12.061 |
| ProSitePatterns |
Znf_RING_CS (IPR017907) - T[206-215] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MKRN1_HUMAN | 44.245 % | 268 | 1.86E-85 |
| MKRN4_HUMAN | 45.704 % | 276 | 7.8E-89 |
| MKRN2_HUMAN | 43.548 % | 238 | 9.31E-75 |