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- Transcript 'Harore.CG.MTP2014.S9...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S99.g05779.01.t
Possible name(s)
LRRC30; MFHAS1; SCRIB
Gene model
Location
S99 [85,488 / 87,030]
Amino acid sequence
Length: 388
>Harore.CG.MTP2014.S99.g05779.01.p
MFGSEDNPRGQQLISINDTANRRSTQANKKKFKSPQNSDFTPFHHPPFVTRLVNTDSNMY
YNKGIEYPMETDDLQHQMNVTRHKFDTKHPLPKPVLAKDDEVQFSTVHNLNERDHHVYMD
DSKSSSRSSLSKLSNYSRLYQTTRTSLSLRGRELTSLPKYLFKMRNLEKLTLSPEREACL
EFKLKELPKEIGRLQNLRLLILDTNELKEIPPEITLLSHLETLTLSNNFLARLPDGFSNM
STLSSLHLANNRFTEMPLEICGLSSLTFLDMSDNAIRKLPGEIGSLSKTIRTLLFYINDL
ETLPDSICKLTLLTMLWLGKNRLSRIPKDFGNLLQLDWESNPCSCNVDGNPLTDPPLEIC
RQGIRVIQDYLRGRSKRSSEHQASRRQR
Nucleotide sequence
Length: 1,167
>Harore.CG.MTP2014.S99.g05779.01.t
ATGTTCGGAAGTGAAGATAATCCACGAGGTCAGCAACTTATCAGTATCAATGACACTGCG
AATCGAAGATCTACCCAAGCAAATAAAAAAAAATTCAAATCTCCGCAAAATTCGGATTTC
ACCCCTTTTCACCACCCCCCTTTCGTCACCCGACTAGTTAATACTGATTCAAACATGTAT
TATAACAAGGGAATAGAATATCCGATGGAAACTGATGATTTACAGCACCAAATGAATGTA
ACGAGGCACAAGTTTGACACGAAACATCCTTTGCCTAAGCCTGTTTTGGCAAAAGATGAC
GAAGTTCAATTCTCAACTGTCCATAACTTAAACGAGAGAGATCATCATGTATATATGGAC
GATTCAAAATCATCCTCTCGCAGCTCCTTGTCGAAATTATCGAACTACAGTCGTCTATAT
CAAACTACCAGAACTTCATTGAGCTTGAGAGGTCGCGAACTAACTTCTCTACCGAAATAT
TTATTTAAAATGAGGAATTTGGAGAAGTTGACGCTCAGTCCTGAGAGGGAAGCGTGTCTG
GAGTTCAAGCTCAAAGAATTACCGAAGGAGATAGGAAGACTTCAGAACTTGCGATTGCTC
ATTTTGGACACGAATGAATTAAAAGAGATTCCACCTGAGATAACGTTGCTATCTCATCTC
GAAACCCTCACTTTAAGTAATAATTTTCTTGCCAGGCTACCAGATGGATTTTCAAATATG
AGCACGTTGAGTAGTCTGCATTTAGCAAATAACAGGTTTACAGAAATGCCTTTGGAAATC
TGTGGTCTTTCAAGCTTGACGTTCTTAGACATGAGTGACAACGCTATCAGGAAATTACCC
GGAGAAATTGGATCTCTGTCCAAAACTATACGAACGTTGCTATTTTACATCAACGATTTG
GAGACTCTTCCGGATTCTATATGTAAACTCACATTGCTGACAATGCTCTGGCTTGGGAAA
AATCGCTTGTCAAGAATTCCTAAAGATTTTGGAAATCTCTTACAACTAGATTGGGAATCG
AACCCGTGTTCTTGCAATGTTGATGGTAATCCACTCACCGATCCTCCGTTGGAAATCTGC
AGGCAAGGTATTCGTGTCATTCAAGATTATTTAAGAGGAAGAAGTAAAAGATCGTCTGAA
CATCAAGCTTCACGTCGTCAAAGGTAA
| Gene3D |
LRR_dom_sf (IPR032675) - T[69-250] 3.7E-19 - T[251-373] 9.9E-22 |
| SMART |
Leu-rich_rpt_typical-subtyp (IPR003591) - T[194-216] 9.0 - T[217-239] 0.051 - T[240-262] 58.0 - T[263-286] 0.11 - T[310-332] 4.2 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[196-217] 7.519 - T[219-240] 6.926 - T[242-264] 5.694 - T[265-286] 7.442 - T[312-334] 6.072 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[218-276] 9.7E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SCRIB_HUMAN | 33.023 % | 101 | 3.85E-23 |
| MFHA1_HUMAN | 35.16 % | 112 | 7.07E-27 |
| LRC30_HUMAN | 30.12 % | 103 | 2.46E-25 |