- Transcript 'KH2012:KH.C9.53.v1.R...' >
- Molecular Tool 'FGF8/17/18>Pax3/7::WRPW (Stolfi 2011)' >
- Transcript 'Harore.CG.MTP2014.S9...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S97.g06901.01.t
Possible name(s)
MESP1; PTF1A; TCF21
Gene model
Location
S97 [179,264 / 179,912]
Amino acid sequence
Length: 215
>Harore.CG.MTP2014.S97.g06901.01.p
MQRSFPEDNSYQIYQYRCQSEWNRQVHPSLLTPQCDVENNPFSFFNDTSLYSTGQQENRA
GTQIMQEIQYKNERTSNTGPLRTRKSNFTKAKPYAIGLASRNGRSERRKTASDREKLRMQ
GVTRQLNVLKDHLPSSWLPDKAKTSKINILRIAISYINYLSEQLSADNADNVHHDAHENT
CKIDFELQDIIDYIDDSYCGNLEQGEQRTKLSLFR
Nucleotide sequence
Length: 648
>Harore.CG.MTP2014.S97.g06901.01.t
ATGCAACGGTCGTTCCCAGAAGATAATTCTTATCAGATTTACCAGTATAGATGTCAGAGT
GAATGGAACAGACAAGTACATCCAAGCTTACTTACTCCACAATGCGATGTCGAAAATAAT
CCGTTTTCCTTTTTCAACGACACTTCTCTTTACAGCACGGGCCAACAGGAAAATCGTGCC
GGTACACAAATTATGCAAGAAATTCAATATAAAAATGAAAGGACAAGTAATACGGGCCCA
TTGCGGACACGTAAATCGAATTTCACTAAAGCGAAACCGTATGCAATCGGATTGGCGTCG
AGGAACGGGCGATCAGAAAGACGGAAAACGGCGTCCGACAGAGAAAAATTGAGAATGCAA
GGAGTGACGCGACAACTTAATGTATTGAAAGATCACCTACCTTCATCCTGGCTGCCAGAC
AAAGCGAAGACTTCAAAAATAAATATTCTTAGGATAGCGATAAGTTACATCAATTATCTG
TCGGAACAGTTGAGTGCTGACAATGCGGACAACGTACATCATGATGCTCACGAAAACACC
TGTAAGATCGATTTCGAACTTCAGGATATTATAGACTATATCGATGATTCATATTGTGGT
AATTTAGAGCAAGGAGAACAAAGGACAAAACTTTCTTTATTTCGATGA
| Gene3D |
HLH_DNA-bd_sf (IPR036638) - T[99-165] 1.0E-15 |
| SUPERFAMILY |
HLH_DNA-bd_sf (IPR036638) - T[103-169] 1.57E-13 |
| CDD |
bHLH_dom (IPR011598) - T[104-165] 5.00976E-12 |
| ProSiteProfiles |
bHLH_dom (IPR011598) - T[106-160] 13.3 |
| Pfam |
bHLH_dom (IPR011598) - T[107-160] 1.2E-11 |
| SMART |
bHLH_dom (IPR011598) - T[112-166] 5.6E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|