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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S9...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S95.g15662.01.t

Possible name(s)

TIMP2; TIMP3; TIMP4

Location

S95 [82,887 / 85,392]

Sequences

Amino acid sequence

Length: 322

>Harore.CG.MTP2014.S95.g15662.01.p
MLLIVIKALVGRARIVELHNDGRVISIHKNKDKSTAAVDDNDGSGEKAEDMEFKTGKVEV
LTGDDFIRPAPVIMGAVRLADTRVPLGPDTRMPGYSPHFADMKAKASSTVLSPGTHFDGK
PRQKRDFAPFSRRIHQRGNRGSFGAFPGAIAVPVIVKRKMKQYKIHIVKAFKGLENVTKD
KRMYLYTPPRPLCSMTLTENRSPHLLMGKIRNGVMVIESCDYKADLSKMKAEEMKNVIRN
LHFRFKSGCDSCRIQVCNRWGCQSNTANRVRQCLWREWWTAIWDGASQFACIMSKSGDCK
WYNSLDKNAKPEDLSKNFSTRG

Nucleotide sequence

Length: 1,275

>Harore.CG.MTP2014.S95.g15662.01.t
CATGACTGTGCTGATTATTCCATTCAACAATCATGTTGAAGTCACTTTTATTAGTATTCG
GATTTTTGCTCCTTGCAGTACAGTTTGCCACTGAAACTGAAGCATGTTCTTGCCAGCCTA
TCCATCCACAAGATAAATACTGTCAAGCAGACTTCGATGTTATTAATAGTAATCAAAGCA
TTGGTCGGACGAGCTAGAATTGTAGAGCTTCATAATGATGGCCGAGTGATCTCAATTCAC
AAAAACAAGGACAAGTCAACTGCTGCTGTTGATGACAATGATGGATCCGGAGAAAAGGCG
GAAGATATGGAATTCAAAACCGGAAAAGTTGAAGTTTTGACTGGAGACGACTTTATACGA
CCAGCGCCTGTTATCATGGGCGCGGTGAGGTTAGCAGATACTAGAGTACCTCTCGGACCT
GATACAAGAATGCCTGGTTATTCTCCACATTTCGCGGATATGAAGGCGAAGGCATCTTCA
ACAGTACTTTCACCAGGCACTCACTTTGATGGGAAACCACGACAGAAAAGAGATTTCGCT
CCATTTAGTAGAAGAATTCATCAGAGAGGAAATCGTGGAAGTTTCGGCGCTTTTCCGGGA
GCAATAGCCGTGCCTGTGATCGTGAAAAGGAAAATGAAACAATACAAGATCCATATTGTG
AAAGCCTTCAAAGGTCTCGAAAATGTGACAAAAGACAAAAGAATGTATTTATATACTCCT
CCAAGACCATTGTGCAGCATGACGCTAACGGAAAATCGTTCACCTCACCTTCTCATGGGC
AAAATTCGAAACGGTGTTATGGTCATCGAATCGTGCGACTACAAAGCAGACTTGAGTAAA
ATGAAAGCCGAAGAGATGAAGAATGTGATCAGGAACCTGCACTTTCGCTTTAAATCAGGA
TGTGATAGCTGCAGAATTCAAGTCTGTAATCGTTGGGGATGTCAATCAAATACGGCAAAC
AGGGTTAGGCAATGCTTATGGAGAGAATGGTGGACAGCGATTTGGGATGGTGCCAGTCAG
TTTGCCTGCATAATGAGCAAATCTGGAGACTGCAAATGGTATAATTCTCTGGACAAAAAT
GCGAAACCGGAAGATTTATCGAAAAATTTCTCCACTAGAGGATAAGTTCTTTTTTTCAAA
TTAACGCAAAGGACTGCGAAATCAAATTATTGTGTTTTCAATGCGATCGATGGTAATCCT
GTTATTGTGGCGGATAATCTTGTAACGAAATATTCTATCACAAAGTGGAAATGCTTTACA
GCTTGCAGATATTAG

InterProScan

PANTHER
TIMP (IPR001820) - T[124-311] 9.6E-24
SMART
TIMP (IPR001820) - T[145-301] 1.4E-6
Pfam
TIMP (IPR001820) - T[157-301] 5.1E-19
SUPERFAMILY
TIMP-like_OB-fold (IPR008993) - T[158-304] 9.42E-21
Gene3D
TIMP_C (IPR027465) - T[223-307] 1.2E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value