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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S9...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S92.g14952.01.t

Possible name(s)

PISD

Gene model

Harore.CG.MTP2014.S92.g14952

Location

S92 [48,601 / 50,573]

Sequences

Amino acid sequence

Length: 467

>Harore.CG.MTP2014.S92.g14952.01.p
MYFTTFIQAGIKNNMVITIRPHKCFNFRKWSFSEQKLMWPWRFLLSFTQMRSFSFTGYKS
EGGIPFKGQGLMKSKPVESEWLKKFVQNRKREQKWGKRYVPIFPDILFYVRTFTVLGSGL
LLGWILYPSFADYSASTDDPTLVYDSAVVSSDEKKKFVQAYLKLPLRLLSRSWGHANSFS
RVPVWLRPYVFGLYSNMYAVNMDEAENPDYKSYKNLSEFFRRAIKPSVRPIDPVSDVVSP
ADGKILHYGWVTNGEVEQVKGINYSLQKFLGPLPSEPVHDDWGREDGYSFTWGTVPLKQY
MRALMHKPDENNLYHCVIYLAPGDYHRFHSPADWVVEHRRHFPGDLLSVNPRIASLIPNL
FVLNERVVLSGKWNHGFFSMTAVGATNVGSIEIYGDVTLKTNRPKRVYGAFYDEKYDSVP
ATKGMAIGEFNLGSTIVLIFEAPKDFAFDIGGDEKIKYGERLQAISD

Nucleotide sequence

Length: 1,650

>Harore.CG.MTP2014.S92.g14952.01.t
ATGTATTTCACAACATTTATTCAGGCCGGCATAAAAAATAATATGGTTATCACGATAAGG
CCACACAAGTGTTTCAATTTTAGAAAGTGGAGTTTCAGTGAACAAAAGCTGATGTGGCCC
TGGCGTTTTCTACTGAGTTTTACTCAGATGAGATCTTTTAGCTTCACTGGTTATAAATCC
GAGGGTGGTATACCATTCAAAGGCCAGGGATTGATGAAAAGCAAGCCTGTGGAATCTGAA
TGGCTAAAAAAGTTTGTACAGAATAGAAAAAGGGAACAGAAATGGGGTAAACGGTACGTG
CCCATTTTCCCAGACATCCTTTTTTATGTTCGCACATTTACCGTTCTGGGTTCCGGATTG
TTATTGGGTTGGATACTGTATCCTAGTTTCGCTGACTACAGTGCCTCGACAGATGACCCA
ACACTTGTTTATGATTCCGCTGTTGTTTCGTCCGATGAAAAGAAAAAGTTTGTGCAGGCC
TATCTTAAGCTTCCATTACGTTTACTTTCTCGTTCTTGGGGTCATGCTAACAGTTTTTCA
CGAGTCCCCGTTTGGCTAAGACCCTACGTATTTGGCTTGTACTCTAACATGTATGCAGTG
AATATGGATGAGGCAGAGAACCCAGACTACAAAAGCTATAAAAATCTTTCAGAGTTTTTT
CGACGAGCCATCAAGCCGAGCGTGCGTCCAATTGACCCAGTGTCTGATGTAGTCAGTCCT
GCAGACGGAAAGATCTTGCACTATGGGTGGGTCACTAATGGAGAAGTTGAGCAGGTGAAA
GGAATAAACTATTCTTTGCAAAAGTTTCTTGGTCCGTTACCCTCGGAGCCTGTTCACGAC
GACTGGGGTAGAGAAGATGGCTATAGTTTCACATGGGGTACAGTACCTCTGAAGCAATAC
ATGAGAGCACTGATGCATAAGCCGGACGAAAACAATCTCTATCATTGTGTGATATATCTC
GCTCCAGGAGATTACCACAGATTTCACTCTCCTGCTGACTGGGTTGTCGAACACCGCCGT
CACTTTCCCGGAGACTTGCTGAGTGTGAATCCTAGGATCGCTTCATTGATTCCTAATCTC
TTTGTGCTCAATGAAAGGGTTGTTCTTAGTGGAAAATGGAACCACGGTTTCTTCTCTATG
ACTGCGGTGGGAGCAACCAACGTGGGATCTATAGAAATTTACGGGGACGTCACTCTTAAA
ACAAACAGGCCTAAACGAGTGTACGGAGCTTTCTATGATGAAAAGTACGATAGCGTTCCA
GCCACTAAAGGAATGGCGATTGGTGAATTCAATCTTGGTTCCACCATTGTTTTAATCTTC
GAAGCCCCGAAGGATTTTGCATTTGACATTGGAGGAGATGAAAAAATCAAGTATGGGGAG
AGGCTGCAAGCTATCAGTGACTAGGTTGAAACTTTTTGTTCCCATAAAGCCCTGTTACTG
TGGTATAATTATTATTTGATTATGTTTCCCATGAAACTATATTCTTGTCAAGTGCATTCA
TACGTATTATTTCTTATTTTTTGCTCACCGCATATGGATCATACATGTCAACCATACGTA
TTTTATTCCCATGTGACTGTGTTTTGTATGCGTATTCCAGTGTTTATTTCAGATCACATT
AAGCAAGCTATCTTGCAGATTGGAGTATGA

InterProScan

Hamap
PSD_type1_euk (IPR033661) - T[15-465] 29.774
PANTHER
PS_Dcarbxylase (IPR003817) - T[153-463] 4.8E-118
TIGRFAM
PSD (IPR033177) - T[202-463] 2.1E-72
Pfam
PS_Dcarbxylase (IPR003817) - T[216-462] 9.7E-64

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PISD_HUMAN 51.562 % 310 4.93E-102