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  1. Transcript 'Harore.CG.MTP2014.S9...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S92.g05537.01.t

Possible name(s)

SCFD2

Gene model

Harore.CG.MTP2014.S92.g05537

Location

S92 [11,747 / 13,772]

Sequences

Amino acid sequence

Length: 674

>Harore.CG.MTP2014.S92.g05537.01.p
MANIIRSACKSTWDDVVLEVKHAVIFMDNSCAECLHWSGGPDLLFEAGATDIKEFSAFES
GKDDQKKAVFITSTPLLGKTEKTIQDIVKSSSFQYCIAITAVNHSVHLMASGKNEGMEEN
ALFSIFEERLCEWMENMNYTARVIHLPIFLAPILNNLFITPVFDAAYPIQKRDLSTYGEE
GEKAPSNLNDFHYYMLPDPYRMMLQLMSASFRSIFERLNCKEEIFVLGHTSHLLGNQLSN
SASQQKKQYPLHCGILFIDRTLDLIGPSLHTETSLIDKLLNMLPELTGHCNNIAIDMGKL
CTAPASDDSYEDLIFPGCLMPSDSACPALLSDLFLLKSNEALKRVKQSLQEAIAEEELQH
DDAKMDAGDVTSDVIIGLVQAFKGNAGAVIYNNNLLQLGMATVQMLESPLNNNWLVLSRT
EKLILQQAEDRDSSGILAHLNGLLMKEDECDITVEEIFSILVFATTAVGLSIDHNDDAIS
DLSSSLSLMLSELPTEELPECVMRALKKTSEEPVDEYDLGQLQDVVNEILKTICEATTEN
FPLRHFKTLDLSDYHPPSYKPLLSQVVSRILSPNKPDLEPDIKYIFSGFRDFLKKGFSMF
RKTAPPRPTDFSNLIIYVIGGITASEVYQVNDVVKQADLRNMNIFLGSNRLVSQLDISDN
TLFTNNLLPDFHFD

Nucleotide sequence

Length: 2,025

>Harore.CG.MTP2014.S92.g05537.01.t
ATGGCCAATATTATACGTAGTGCGTGCAAGTCTACATGGGACGATGTAGTCCTAGAAGTA
AAACATGCTGTTATTTTCATGGACAACTCATGTGCAGAATGTTTACACTGGAGTGGAGGA
CCGGACTTGTTGTTTGAGGCAGGTGCTACAGATATTAAAGAATTTTCGGCGTTTGAGAGT
GGAAAAGACGATCAGAAGAAAGCTGTATTTATCACGAGCACGCCTCTACTTGGAAAGACA
GAGAAAACAATCCAAGATATAGTAAAATCGAGCAGTTTCCAGTACTGCATTGCTATTACT
GCTGTGAACCATTCTGTTCATTTGATGGCTTCTGGTAAGAACGAAGGTATGGAGGAAAAC
GCATTGTTCAGTATCTTTGAGGAAAGATTGTGTGAATGGATGGAAAATATGAATTATACA
GCTAGGGTCATACACCTTCCCATCTTCTTAGCACCCATACTTAACAACCTCTTCATCACT
CCCGTTTTTGATGCAGCTTATCCGATTCAGAAAAGAGACTTGAGTACTTATGGCGAGGAA
GGTGAAAAAGCGCCATCAAATTTAAATGATTTTCATTATTACATGTTGCCCGATCCGTAC
AGAATGATGCTGCAACTAATGAGTGCTTCGTTCCGTAGTATTTTCGAGAGACTCAACTGT
AAAGAAGAAATATTTGTTTTAGGTCATACTAGCCATTTGCTCGGGAACCAGCTTTCAAAT
TCAGCAAGTCAGCAGAAAAAACAGTACCCTCTTCATTGCGGTATTCTCTTTATAGACAGG
ACACTGGATCTCATCGGACCTTCTTTGCATACGGAAACCTCCCTCATAGATAAATTACTT
AACATGCTGCCAGAACTTACAGGTCATTGCAACAACATTGCTATCGACATGGGAAAGTTG
TGTACTGCCCCGGCATCCGATGATAGTTACGAAGATTTGATATTTCCTGGTTGCCTTATG
CCTTCAGATAGTGCTTGTCCTGCACTTCTCTCAGACCTTTTTCTGCTCAAATCAAATGAA
GCGCTCAAGCGAGTAAAGCAGTCGCTGCAGGAAGCCATCGCCGAGGAGGAACTGCAACAC
GATGATGCCAAAATGGATGCTGGGGATGTTACATCAGACGTTATCATTGGTCTCGTACAA
GCGTTCAAAGGAAATGCAGGCGCCGTCATATACAACAATAACCTCTTGCAGTTAGGCATG
GCCACCGTGCAAATGTTAGAAAGCCCATTGAACAATAACTGGTTGGTGTTGTCAAGGACT
GAAAAACTAATACTACAACAGGCCGAAGACCGAGATTCTTCTGGAATTCTTGCCCATCTC
AATGGTCTTTTGATGAAGGAAGATGAGTGTGACATTACTGTAGAGGAAATTTTTTCCATC
CTAGTATTCGCCACGACAGCAGTGGGATTGTCCATAGACCACAATGATGATGCGATCTCC
GATCTATCCAGCTCCTTGTCTCTGATGCTTTCTGAACTTCCTACGGAAGAGCTGCCGGAA
TGTGTTATGAGAGCACTGAAGAAGACTAGCGAAGAACCGGTTGACGAATATGATTTGGGA
CAGTTGCAAGACGTGGTTAACGAAATTCTCAAAACAATATGCGAAGCAACGACGGAAAAC
TTTCCTCTTCGTCATTTTAAGACACTGGACCTGAGTGACTATCACCCACCTTCGTACAAG
CCATTACTGAGTCAAGTAGTTAGCCGTATACTATCGCCAAACAAACCAGACCTCGAGCCA
GACATCAAATATATATTTTCTGGGTTCAGGGATTTTTTAAAGAAAGGATTTAGCATGTTC
AGAAAGACTGCTCCTCCACGACCCACTGATTTCTCCAATCTCATTATTTATGTCATTGGC
GGAATCACTGCCAGTGAAGTTTACCAGGTTAATGATGTTGTAAAGCAAGCAGATTTGAGG
AACATGAATATCTTTTTGGGTTCAAATAGATTGGTGTCACAATTAGATATCAGTGACAAT
ACGTTATTTACAAATAATTTATTGCCAGACTTTCATTTTGACTAA

InterProScan

PANTHER
Sec1-like (IPR001619) - T[8-665] 2.2E-85
Pfam
Sec1-like (IPR001619) - T[504-653] 4.9E-7
SUPERFAMILY
Sec1-like_sf (IPR036045) - T[534-656] 9.81E-13
Gene3D
Sec-1-like_dom2 (IPR027482) - T[555-660] 8.5E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SCFD2_HUMAN 32.853 % 346 8.23E-110