Aniseed - Transcript Card

Transcript Model

Transcript Id

Harore.CG.MTP2014.S92.g04228.01.t

Possible name(s)

TGM2; TGM6; TGM7

Gene model

Harore.CG.MTP2014.S92.g04228

Location

S92 [168,354 / 169,565]

Sequences

Amino acid sequence

Length: 231

>Harore.CG.MTP2014.S92.g04228.01.p
MDHSGSDFTNLSHLVKAAYDVTIEKIDDIEMGSDFTVTIKIKNKTKKERKANLKIVCKSM
RHTGHLHALVKREKQVLSLPSHKELVVKLSVSSDEYMKCIVDNFMINVVAMIIDCDDGNT
VVENGDLTILTPECMAIELPTAVPWGQKSFFSVKFQNKMPMKLTDCKFQVDIRGELKEYI
VHDPIAPGQTYTVKDIDVCPQYGWRTIYPVVFFKSNETKDMSESCRIRVEY

Nucleotide sequence

Length: 696

>Harore.CG.MTP2014.S92.g04228.01.t
ATGGACCATTCTGGCTCCGATTTCACCAATCTGTCTCATCTGGTCAAAGCAGCATACGAC
GTAACCATCGAAAAAATTGATGACATTGAAATGGGTTCCGATTTCACTGTGACAATCAAG
ATCAAAAACAAAACCAAGAAAGAACGAAAGGCCAATCTCAAAATCGTCTGCAAGAGCATG
AGGCACACAGGACATCTCCACGCTCTTGTTAAAAGAGAGAAGCAAGTGCTGAGTCTCCCA
TCACACAAAGAGTTGGTAGTGAAGTTATCCGTCTCGAGCGACGAGTACATGAAATGCATT
GTGGATAATTTCATGATCAACGTGGTGGCGATGATCATCGACTGCGATGATGGCAACACC
GTCGTTGAGAACGGCGATTTGACAATTCTTACACCAGAATGCATGGCGATTGAGCTTCCA
ACCGCTGTACCATGGGGTCAAAAGTCATTCTTTTCGGTGAAATTCCAAAACAAAATGCCG
ATGAAGCTGACCGATTGCAAATTTCAAGTAGATATCCGGGGAGAGCTGAAGGAGTACATT
GTACATGACCCTATCGCTCCCGGTCAGACGTACACCGTCAAAGACATCGATGTTTGCCCG
CAGTATGGCTGGAGGACAATCTATCCGGTTGTATTTTTCAAAAGCAACGAGACGAAAGAT
ATGAGCGAGAGTTGCAGGATCCGCGTCGAATATTAA

InterProScan

Gene3D	Ig-like_fold (IPR013783) - T[19-131] 5.8E-17 - T[135-230] 1.8E-7
SUPERFAMILY	Transglutaminase_C_sf (IPR036238) - T[21-122] 5.23E-21 - T[135-229] 9.07E-8
Pfam	Transglutaminase_C (IPR008958) - T[22-112] 4.6E-12

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value