- Transcript 'Phfumi.CG.MTP2014.S3...' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Cisavi.CG.ENS81.R247...' >
- Transcript 'Harore.CG.MTP2014.S9...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S90.g13380.01.t
Possible name(s)
DEAF1; SAMD11; SAMD7
Gene model
Location
S90 [3,985 / 31,566]
Amino acid sequence
Length: 1,268
>Harore.CG.MTP2014.S90.g13380.01.p
MQINDYPKFYCRLNPNYYESMRTRSALLPEQNPQGDSRQERKTKQQAQKVKNESSNHASE
EIAMSPEDEKSPIVLGDINDNDIADENSVAAAEVDVHSEGSKVVYTDVDAERDVMDDSVD
ETNGENTNNNNTEEGVSNEDDKDDIKKDLSEKEISLKVTDADDDVATDLSTKTQNDERDD
TNDETPSFTEQKKDDESTSDTPSNPIPAKFAFPGGIPGFPTNPSALLSGQLQSNFARSLS
AQFYSSLSMLASQAMLNVKEEPKDANNNYQSYHHQSSPENMTTQTTIHDDVQPERTSSRN
SLDSNQSFDENCPNNRGSPPLCPISFSSTLSGGSEAPQRPLSELSPKALAEQLRNNDSAS
MVVCRQQKFPARSAGYAKQHYSSSGGGTPPPAFPTLTSSNNESYSGGLENPTTNSNSSPS
LHHFTTRYTIEMPSDPSRLGVELILDHDNAEPVIEVECGGNRGLLYVNKLCQGSKGQSIL
FNDEWLTPNEFQFISGRETAKDWKRSIRHCGKSLKTLMTKGILQVHPPVCECQLCRGAQG
SKILANKKNLLKDNSKKIKSSPTPETKLSPGFDTSMMMRPGFDGGLSSIISQLHKANGFE
TNGGSETLDLTTKSSWDRSSSPSPRKHHRDDSFLEQKMSSSRENGSSSSPVQKRSHSENE
EDHNFDGSTFPSTYPYLPPEEQYRRMMALLNRSLSPGDPQFPLYNMPSLESLRFPTANFP
DLTALQTAFQLESNLYDNRERGKTKSHYNEIRKESNAFDLSRNMKDRTDCYSRKRDFPFS
QSHPKNHGNKNEKYRKSDRICSPLDGRRSRPDLTKQNSHGYIALESRSRGTSFNNPGSNH
ENFRGWPNHTLDLGYRRQDPVIDLNVSSSSSSGRVPDWNSKLSPSWSSERSQVNKKLNDW
KRTSGHGTISPGRKTNGTFHGPYPDQHIILDRIPINKNPVTTLHHRPNFNHDNEPPSYPH
HTQRFGSSKSTISHRYDNRSKQHMKESRSSRSPSAECDTKTRMPMLDLHKHAVPVVSLTS
SSVDKNMESCKIARNDLSDRDTGFGEMSSRRQSSSAPPPRLLSRDDHRVESRPKSAQDVV
KSESFSYDPNPQQLPITTSSLFLRQKTNSRRNSSSRYRSQSCIPSTEQVDWKYSNLLTER
NRTIQQALNEMHSWTVDEVCAFVRKIDPAFENYTEEFKRHELDGEGLPLLTEHHLMDLMK
MKLGQALKIVAHVKRFLTIYADTVTCCHRSLLCNDLLLTPPPKMTEKVVETSTNPNEQLR
MTTSSLSQ
Nucleotide sequence
Length: 4,890
>Harore.CG.MTP2014.S90.g13380.01.t
CGCGCGGAGGTTCGTGAACACACTCACACAGTCAGAATCTAGTCATTATAATGGAACACC
GTAAACAGTATAGACAGTAAAGGATAGATAAAACTGACATTAGGCCATAAAAGTGCTATA
AGCAGAAGAAGACAATGCAGATAAATGACTATCCTAAGTTTTACTGTCGCTTGAATCCGA
ATTATTATGAGAGCATGAGGACGAGATCAGCTCTTCTACCTGAACAAAATCCTCAAGGTG
ACTCCAGGCAAGAAAGGAAAACTAAACAGCAAGCGCAAAAAGTTAAAAACGAATCGAGCA
ATCACGCAAGTGAAGAAATTGCCATGTCGCCAGAAGATGAAAAATCACCAATCGTTTTGG
GTGATATCAATGACAATGATATCGCGGATGAAAATTCTGTTGCAGCCGCAGAAGTTGATG
TGCATTCGGAAGGTTCCAAAGTCGTATATACCGATGTTGATGCTGAAAGAGACGTTATGG
ATGATAGTGTTGACGAAACGAATGGAGAAAACACGAACAATAACAACACAGAAGAAGGTG
TAAGCAATGAAGATGATAAAGATGATATCAAGAAAGATTTAAGTGAAAAAGAAATATCAC
TAAAAGTAACTGATGCTGATGACGACGTGGCAACAGATTTATCCACGAAAACCCAAAATG
ATGAAAGGGACGATACCAACGATGAAACACCTTCATTTACAGAACAAAAAAAAGATGATG
AAAGCACTAGCGACACACCTTCGAATCCTATTCCAGCAAAATTTGCGTTTCCCGGAGGTA
TACCTGGCTTTCCGACTAACCCTTCTGCACTTTTGTCGGGACAACTGCAGTCCAATTTTG
CGAGATCCCTCTCTGCTCAGTTTTACAGCAGTTTAAGTATGTTGGCGTCTCAAGCAATGC
TTAACGTTAAAGAAGAACCAAAGGACGCCAATAACAATTATCAGTCTTACCATCATCAAT
CATCACCCGAAAACATGACAACGCAAACTACAATTCATGATGACGTGCAACCGGAGCGGA
CGTCATCAAGAAACAGTTTGGATAGCAATCAGTCTTTCGATGAAAATTGTCCAAACAATA
GAGGTTCTCCACCACTATGCCCTATTTCCTTCTCTTCGACGCTTTCTGGTGGATCGGAAG
CACCACAGCGACCCCTGTCGGAACTTTCTCCAAAAGCTCTCGCAGAACAATTACGTAACA
ATGATTCAGCCAGTATGGTTGTATGCAGACAGCAAAAGTTTCCGGCCCGTTCTGCTGGCT
ATGCGAAACAGCATTATTCCTCTTCAGGAGGCGGCACGCCACCTCCAGCGTTTCCTACGC
TAACTTCCTCGAATAATGAATCCTATTCTGGAGGACTGGAGAATCCTACTACTAATTCAA
ATTCGTCACCCAGTCTTCATCATTTCACCACGCGGTATACGATCGAGATGCCATCCGATC
CTTCCAGACTCGGAGTCGAACTAATATTGGATCATGACAATGCTGAGCCTGTGATAGAAG
TAGAGTGTGGTGGAAACAGAGGACTTCTCTACGTTAACAAATTATGTCAAGGAAGTAAAG
GTCAATCCATATTATTCAACGACGAGTGGCTGACGCCAAACGAATTCCAGTTTATCAGCG
GACGCGAAACTGCAAAAGATTGGAAACGAAGTATTAGACACTGCGGAAAAAGTTTAAAAA
CTCTAATGACCAAGGGAATTTTGCAAGTTCACCCACCAGTTTGTGAATGTCAGCTGTGCA
GAGGAGCACAGGGGTCAAAAATACTAGCGAATAAGAAAAATCTGCTAAAAGATAACAGCA
AAAAAATAAAAAGTTCGCCAACGCCAGAGACAAAACTTTCACCAGGATTCGACACATCTA
TGATGATGAGGCCAGGATTCGACGGTGGTTTAAGCTCCATTATCTCCCAGCTACACAAAG
CGAACGGATTCGAGACTAATGGCGGATCTGAAACACTCGATTTAACAACCAAGTCGAGTT
GGGACAGATCGTCTTCGCCTTCCCCCCGTAAACATCATAGAGACGATTCGTTTTTGGAAC
AGAAAATGAGTAGTTCTCGGGAAAATGGTAGTAGCTCTTCGCCAGTTCAGAAACGATCAC
ATTCTGAAAACGAAGAAGATCACAACTTTGATGGTAGCACATTTCCTTCAACATATCCAT
ATCTTCCTCCCGAAGAACAGTATCGTCGCATGATGGCGCTACTTAACCGATCTCTAAGTC
CGGGCGATCCACAATTTCCTTTGTACAATATGCCTTCATTGGAATCCCTAAGATTCCCTA
CTGCTAACTTTCCAGATTTGACAGCATTGCAGACTGCCTTTCAATTGGAATCCAATCTAT
ATGATAATAGAGAACGAGGGAAAACTAAATCACATTACAATGAAATTCGTAAAGAATCAA
ATGCATTTGATTTGAGTCGCAACATGAAGGATAGGACCGATTGCTACAGCCGTAAACGTG
ATTTCCCATTCTCGCAAAGTCACCCAAAAAATCACGGAAACAAAAACGAGAAATATCGTA
AGAGTGACAGAATTTGCTCACCACTAGATGGTCGTCGGAGTCGTCCGGATCTTACGAAGC
AAAATTCCCATGGTTATATAGCTTTAGAAAGTCGATCTCGGGGTACAAGTTTTAATAACC
CCGGTAGTAATCATGAGAATTTTCGTGGGTGGCCTAATCATACCTTGGATCTGGGTTATC
GACGACAAGACCCTGTGATTGATCTTAACGTTAGCAGCTCATCGTCCTCTGGTAGAGTTC
CCGATTGGAATTCAAAGCTTTCTCCTTCCTGGTCTTCAGAACGCAGTCAGGTCAACAAGA
AATTAAATGATTGGAAGCGAACTTCCGGCCATGGTACAATAAGTCCTGGTCGTAAAACGA
ACGGTACTTTTCACGGTCCCTATCCAGATCAGCATATAATATTAGACAGAATTCCTATCA
ATAAGAATCCAGTTACGACACTCCACCACCGTCCGAATTTCAACCACGATAATGAGCCCC
CGTCTTACCCCCATCACACTCAGCGTTTTGGCTCATCAAAATCAACTATCAGTCATCGAT
ACGATAACAGGTCTAAACAACACATGAAAGAATCCCGAAGTAGTCGTTCACCATCAGCCG
AATGCGATACCAAAACGAGAATGCCCATGCTCGATCTCCATAAGCATGCTGTTCCTGTAG
TGTCACTCACGAGCAGCAGTGTCGATAAGAATATGGAATCCTGCAAGATTGCAAGGAATG
ATCTGTCAGATCGAGATACCGGATTCGGAGAAATGTCTTCTAGAAGACAAAGTTCAAGCG
CGCCGCCTCCTCGTTTGCTGAGTCGAGATGACCATAGAGTGGAGAGTCGTCCGAAGTCAG
CTCAAGACGTAGTGAAATCGGAAAGTTTTTCATACGATCCTAACCCACAACAGTTACCAA
TCACAACATCGTCATTGTTTTTACGTCAGAAAACAAATTCTCGCAGGAATTCATCGAGTC
GATACCGCAGTCAGTCTTGTATACCTTCTACAGAACAAGTTGACTGGAAATACAGTAACT
TGTTAACAGAAAGAAATCGTACTATCCAACAGGCACTGAATGAAATGCATTCCTGGACAG
TTGATGAAGTGTGTGCATTCGTTCGTAAAATTGATCCTGCTTTTGAAAATTACACAGAGG
AATTTAAAAGGCATGAATTAGATGGCGAAGGTCTTCCTTTACTCACCGAGCATCATCTAA
TGGATCTTATGAAAATGAAACTTGGACAAGCTTTGAAGATTGTCGCTCACGTCAAGCGAT
TTCTAACAATTTATGCGGACACGGTTACATGTTGTCACAGATCTTTACTTTGTAACGATC
TTCTTCTTACCCCTCCGCCTAAAATGACCGAGAAAGTAGTTGAAACATCAACCAACCCAA
ATGAGCAGCTTCGGATGACAACCTCCTCTCTTAGCCAGTGACCAGTGATTATTTTATGTT
TGTTTCACAGTGCAATAGTAATTTAATTCTAATATTCTTTTACTTACCTCATTAGTCTGG
CTGCCTTCAATGTTCGAATATATTAGTAGATTATTACTCATGTCCCATGATCATTCAGAT
TAGTCCAACGAATTGCTAAGGCCTGCTTTTAAACTACAAGCAGGGCAGCTCTCTAGGAAG
TGGACTGATGAATAAATACCCAGACTTTCAGTTGATAAAATCCTTATCGAGAACATAAGA
GAGCTAATTATAGATTGACCTATGAAACTTTCTTACTTAGTCAAACTCAGCTTAGAATAT
AATTAACAGATGTAAATAATATATGTGCTAGCTAGCTGGATTAGTGGGTTTTAGCATTAC
CATCTTCTGTAGATTTGTGCACCCTTACTTGATGGTTGATTTATTTTGGTGTCGCGTTAT
TACTGTAAGCTAGCATCCTTTATTTTACTTCTTATCATTCTTACACCAATCTTGTAGTGC
AAATTAAAATTTTGACTTGAAATTCTAAGGCCTCTCCCAATAGCAAAGCAATAGAATATC
ACCATACTCTATACTAGTCTAAGATAACAGTTGCTATGAGATCATCACTTTGTAAAACGT
TTCAAATATATTTTCTTTTTTATATTTAAATTCTTCATCCACTATAGTTCCAATTAAGAA
TTATTTGTTTAGCTATGGTTTAAGTAGTTATGCCTCAACAAAAATGAAATAAGTGCGTTG
CATATATTTAAAGTTGAAGGTGGAAGCCAAATGAAGACAATCTCTATTCAAGACCAAGAA
ATTTCAGTACTATACGCGGATATTTCCACAGTGTTTTCCTTTCTTCTATTAAGGATTTCT
AGCAAATTTCGTTGCAAAAAAACGTTTTTTTATGTGTTTATTTAGAGAATTTAAAAAGTC
GCGGTTGAAATATATCCGATATTAGCCAAG
| PANTHER |
GMEB1/2 (IPR024830) - T[114-214] 4.4E-64 - T[409-540] 4.4E-64 |
| ProSiteProfiles |
SAND_dom (IPR000770) - T[442-524] 17.8 |
| SUPERFAMILY |
SAND-like_dom_sf (IPR010919) - T[446-535] 1.08E-27 |
| Gene3D |
SAND-like_dom_sf (IPR010919) - T[446-539] 1.4E-27 |
| Pfam |
SAND_dom (IPR000770) - T[450-523] 6.5E-23 |
| SMART |
SAND_dom (IPR000770) - T[452-524] 9.1E-24 |
| SUPERFAMILY |
SAM/pointed_sf (IPR013761) - T[1149-1218] 1.38E-14 |
| SMART |
SAM (IPR001660) - T[1151-1219] 1.3E-9 |
| Pfam |
SAM (IPR001660) - T[1153-1216] 3.6E-10 |
| ProSiteProfiles |
SAM (IPR001660) - T[1154-1219] 11.22 |
| Protein Name | Identity | Bit Score | e-value |
|---|