- Transcript 'KH2012:KH.C3.313.v2....' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Cisavi.CG.ENS81.R116...' >
- Transcript 'Harore.CG.MTP2014.S9...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S90.g01947.01.t
Possible name(s)
PRICKLE1; PRICKLE2; TES
Gene model
Location
S90 [170,608 / 177,698]
Amino acid sequence
Length: 589
>Harore.CG.MTP2014.S90.g01947.01.p
MTTEVVSGVTEMALESDKELFNLANPKCEPSDPGSNHNKVLTHEVGAGAPCLKCGNKCPG
LDLHFWRKICRNCKCKQEDHDVQAEISTRGIENIGKLLMHDQGQVTEKAPTSHHSSPDKS
QAPVNGHVNVVSTSKTQSVTTPETQTTKSQVSPGDSLHFTIDIGGQKHELDFGGNSDAAH
REKSHPYATSYHSSTTTSDLPPPPVLDVPTSIKLSRDAPPPPPAYPASPDLPPPPIDMQF
NQAEDTPPVPPLPQEYEQKLKLDSPQKYTTTVTITTNKQVKSGSALEILNAIVIVRKDPN
ADLKIPPAPSNDRRGSSSSSSGAAGESDRSDTGSEISYDWKPPVQNDKLAVEYIASLPKE
KQPIRGTEGGQYRRKQLMRQLPPHDQEPGACHDLTPQEKQEMDVFVTQYREKALGAGVVN
EAGKIKTCVHCDEILKIGDVMVIAERAGADKYWHPKCFVCTECKELLVDLIYFYHDGKIY
CGRHYCELHKPRCAACDELIFAPEYTQAEDCYWHLKHFCCWQCDQPLGGKNYVPHENQPV
CIPCYEKSFAHKCATCKQVKIYFLGIIKPGNSPINIVVANATDPAMLRI
Nucleotide sequence
Length: 3,717
>Harore.CG.MTP2014.S90.g01947.01.t
AGATATCAAGTGAAATATTTTAGGAATTTACTTGCGGCCACTTATCAAGTTTCAAGTGGA
AACAAAACTTCTATTGAAGTGTTCTGTGTGGTGTTTACTAGTGGTCTTTAGTTTCCCTGC
ATTCGGTTTCGAACCCTGGAACAGTGAATAAGAATATCCAAGACAATGACTACAGAAGTG
GTATCCGGTGTCACCGAGATGGCACTAGAATCAGACAAAGAATTGTTCAACCTAGCGAAC
CCAAAATGTGAACCTAGTGACCCAGGGTCCAACCACAACAAAGTTTTAACTCACGAGGTT
GGGGCAGGAGCGCCGTGTCTGAAGTGTGGAAACAAATGTCCAGGACTTGATCTGCATTTC
TGGAGAAAAATCTGCAGGAACTGCAAATGCAAACAAGAGGACCATGACGTGCAAGCAGAA
ATATCCACAAGGGGAATTGAAAATATTGGCAAATTACTGATGCACGATCAAGGCCAGGTG
ACAGAGAAAGCGCCAACGAGCCATCATTCATCACCAGACAAATCCCAAGCTCCGGTTAAT
GGACACGTCAATGTTGTTTCAACTAGTAAAACACAATCAGTCACTACGCCAGAAACTCAG
ACAACAAAATCACAAGTCAGTCCTGGTGATTCTCTTCACTTTACCATAGACATAGGAGGA
CAGAAACATGAACTAGATTTTGGAGGTAATTCCGATGCAGCTCATAGAGAGAAATCCCAT
CCGTATGCTACCAGTTATCACTCGTCAACTACAACGTCTGATTTGCCTCCACCACCAGTC
CTGGATGTACCAACCAGCATTAAGCTATCAAGAGATGCCCCACCACCACCACCTGCATAT
CCCGCGAGCCCCGATTTGCCTCCACCACCTATCGATATGCAATTTAATCAGGCTGAAGAC
ACTCCTCCAGTACCCCCACTTCCCCAGGAATACGAGCAAAAGTTAAAGTTGGATTCTCCA
CAAAAGTATACGACGACAGTTACAATAACGACAAACAAACAGGTAAAGAGTGGAAGTGCA
CTTGAGATATTGAATGCAATTGTTATTGTCAGAAAGGACCCAAACGCAGATTTGAAAATA
CCACCAGCGCCATCTAACGACAGAAGAGGATCGTCTTCCTCGTCATCAGGTGCTGCTGGT
GAGAGTGATAGAAGCGATACAGGGAGTGAAATATCATATGACTGGAAGCCACCAGTGCAA
AATGATAAATTAGCCGTGGAATACATCGCATCACTCCCGAAGGAAAAGCAACCGATACGT
GGCACAGAGGGCGGACAATATCGGCGTAAGCAATTGATGAGGCAACTTCCACCTCATGAT
CAAGAACCAGGAGCGTGTCATGATCTCACCCCACAGGAAAAGCAGGAAATGGACGTGTTT
GTGACTCAATACAGGGAAAAGGCATTGGGTGCTGGCGTGGTGAACGAAGCTGGTAAAATT
AAGACATGTGTTCACTGCGATGAGATACTGAAGATAGGCGATGTAATGGTAATAGCTGAG
AGAGCTGGCGCCGACAAGTACTGGCATCCTAAATGCTTCGTTTGTACCGAGTGCAAAGAA
CTTCTGGTGGATTTGATTTATTTTTACCACGATGGCAAGATTTATTGTGGAAGACATTAC
TGCGAACTGCATAAACCAAGATGCGCAGCATGCGATGAACTTATATTCGCACCTGAGTAT
ACACAAGCGGAAGACTGCTATTGGCATCTCAAGCATTTCTGTTGTTGGCAATGTGACCAA
CCACTAGGTGGGAAGAACTACGTTCCTCATGAAAATCAACCAGTCTGCATACCATGTTAT
GAGAAATCATTTGCGCACAAATGTGCTACGTGTAAACAGGTGAAGATATACTTCCTAGGT
ATAATCAAACCTGGGAATAGCCCGATTAACATAGTGGTAGCAAATGCTACGGACCCCGCG
ATGTTACGTATTTGAGTCATTGCTCCAAATATAGAATGGGTCACATTCCAGGAACATCAC
TGGCATGCCCTGCCCGTGTGTTTCAAATGCAGTAACTGCGACCAGTCGTTGGTTGGAAAG
CCGTGCATTCCCAAGGGTGAGATGGTGTTTTGCTCCAGCAAATGCAAGAAGGAAAAGATT
CCACCGCAATAAAGAAATAGCGATAATAACTAAATGAATAACGTACAGTAATTGCATTCC
GTCCTATATCTTTGTTGCTATCGAATGCTGCTTGTGACGGGAGGACGCCGATAATCTAAT
TAGCGGTAATATCGGAAGGCCTTTCGTTATATATGAAATTATATTCTAATCGTTGGTGTG
GACAGTATGGAATATACATGATTACAAGAAAGCGCTGATGTAAGTTCGTAGAGAGCCTGA
TACATCGTACGGGATAAATATCTGTTGTATATAAACTGCTCATGTTTGCTGGAATTGGCG
GTAATATGAAAATGACTGTTCGAACGGTGCTATAGTACCAGAAAGTGAAGATATATTGAA
TACACAGTGTATGGTATTGATATATTAGTAGCATTACCGGCAAGAGATATGAGGTATCGA
CCGATTTATAACTTTACGCCTGTACTTCAGACCATGTTCATGATATAAATCCCAATTCTA
TCCGTTCAAAATGACATGCTATCACCGTATTAGTAGTACTCGCGTTTCTACTTCCCTTCG
ATTACGGTCGCAGTGACTACCTTGATGGAACTATAACAGTCGAAATTGACGCTATTATTC
AACCAACTGACGTCATTACCATTTGCGAACATTAGAATTCCATGAAAATAATTCAAATTT
GTTGTGCTGGTTTGCAGGTCGCATCCGACCCACATGCTGTTAACTTTCAGCAAATTGTTT
TATTCAGTACAGTTAACAGCATAATCGTCGCCGTTAGCATCACTTATATGTCCGTCTTTC
GCGATCTTGTATTAATAGAACAGCGTTAAATTCTTCTATATATTCTCTTTACGCATAATG
AACTTATTCGTGTATTGTACTTCAATTACCGAATTAATTTCCAACTTTTACCAGTAATAA
AATGGTCAGCATAGGTATACATATACCAGTGTGCTGTGAATTGTCTTACTAAAAATCTTA
GAGCATAAGAAAATCGAAGTTTATCGTGTCAGTCTGATCCATAATCTTTTAACTTCAACC
GAGATGGATCGTAATGGATGTAACTAATGAGATGAGCACTGAGGGAAAACGTGTCTTGTA
TCGTTTGACAGCAAGACATTGATGAGAGAAGGCGCGCGTGATGTTGCCATTATTATACTT
GGTAGGTTGTGTGTTGTTCAATGAACGTCAAACGAATTATTGAAGGATTTGCGGAATAAA
AGGAAAATATTTGATTGTCGAGAAAGGCAATCCATAAAATACACTGACTCCAAGAGAAAA
GAATCAATTATCACGAGTCGTACACTCTACAGACCTGTTTGACGTTCCAGTAGTTTCAGC
CTATTAGCATCAACTGGTATTTAGAAACAGTACAACACAGTTAGGTGAGTGTGAGAAAGA
TTTTGTGCATATTACAATGCTCAGGAAGAAAGCACCACGAGTCGTCGTACTCTACAGATA
TGCTCGACGTTTGAATGGGTAACAGTTTCCGCCAATTAGCATTGATATTTCATGATGGGT
ATAGCATAGTGAAGGTAAATGTGAGAAAGATTTCCATGCCGATTACATGGTGGCGGTGGA
GGTGGATTACAACTAGGTGAAAGAATGCGAAGGTCGTATAAGAACAATGGAAATTTC
| ProSiteProfiles |
PET_domain (IPR010442) - T[319-426] 35.018 |
| CDD |
PET_testin (IPR033724) - T[336-423] 1.29848E-37 |
| Pfam |
PET_domain (IPR010442) - T[337-419] 2.2E-31 |
| ProSiteProfiles |
Znf_LIM (IPR001781) - T[426-491] 12.573 - T[492-551] 10.098 |
| SMART |
Znf_LIM (IPR001781) - T[427-484] 1.8E-10 - T[492-544] 1.3E-13 |
| Pfam |
Znf_LIM (IPR001781) - T[446-488] 1.2E-10 - T[493-549] 2.2E-11 |
| ProSitePatterns |
Znf_LIM (IPR001781) - T[493-527] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PRIC2_HUMAN | 48.291 % | 229 | 1.17E-65 |
| PRIC1_HUMAN | 47.826 % | 228 | 2.42E-65 |
| TES_HUMAN | 43.125 % | 260 | 4.1E-81 |