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TRANSCRIPT CARD

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  1. Transcript 'Boleac.CG.SB_v3.S405...'
  2. Transcript 'Cisavi.CG.ENS81.R65....'
  3. Transcript 'Harore.CG.MTP2014.S8...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S8.g15369.01.t

Possible name(s)

AP000311.1; ATP5PO

Location

S8 [253,290 / 256,514]

Sequences

Amino acid sequence

Length: 263

>Harore.CG.MTP2014.S8.g15369.01.p
MLFQFLQLWSKKPRVKFIQRLTGQKLKWGCLNFARCLFHLFRQVLVKKITMASQLSRVIS
RSFSCSAIRNNLVQTPIPVYGISGTYAHALYSAAVQAKVKPNVAQDLTTLREILKNQKVA
DYMHDPFVETIQKLGLLKEVASKVKMTETVVNFFGVMADNKRLNLVGEVADVYSRIMSAE
RGEVPATVTTASPLDPTQKKNLTTALTKFLNKGEKLILHEEVDPAILGGLIADIGDKYTE
MKYIDMSTASKVTMYSELIRQNV

Nucleotide sequence

Length: 4,524

>Harore.CG.MTP2014.S8.g15369.01.t
CTTCCGAGTACCAACAATCAGGGTTGCGTTGTTGTTTGTATCTTAGCAACGTAAAAACAT
TCCCTCCGCTTTTATTGGAATAACATAATACAACTGTACATACCATGTTAATACCTCAGT
TAAGTCACTATACAGTGAATTTCTTATTATTTTCCGAACATGGAGAGACCTCCAAGATCA
ACTCAACCTATAATAAATACAAGTGGTATGCTTGGAAGTAGCGCTAGTATAGGATTCCGT
AAACTCATTGAAGATTCTATGCGGGATGTCGACCAACGGTAAGGTCATCTTAGACCACAG
ATTGGATAACAGAGACATACATCTTCTGTGCAGAATCATTGATCTCGTATTCGAATACAT
CCTTGGACGTTTGCGTCGAAATACGCAATGCGACTTTGAACTAACTTCAATTACGGACGT
GCACAAGTTACAAATGCGGGATAAGCAATTTGGAGACATCTACGATTCTGTTGCTGCAGA
ACTTGGATTCTCAAACAGCAACAAGAAAGATAGCACTATATTCCAGCTGTATTCTTTCAG
GAGAGATTTCGCTTTTGTGCTTGATAATTCAAATAACAGAGAACATTCTCTCATGAATGA
AGATGACCAAGAGGAAGAATCTGATCCTAGTGGAAAAAATCACAGCATATTTTTTCTGCC
TCTCGAGTCTAGTCAAATCCAAAAATATGCTTTGGGAAAAATCAAGTCCGGAGTTGATAA
TCAGAACTTAGCTGAAGCATTAAACACTTGCATCAATATTCTCACAAAGATGTCTAGCGA
TAAAGCAGCATCTCACTGTACTGAGGTATAAATTGGTTTGTCAGAAATATGGTAAAAATA
TATATTTCATTACAAAATATGACGATTTGAAATATAGAAACAGTTTGTTAGATAATACAA
TCAATCAGTTATGTATCTGTAAATCCACTGTTAATTTTTCAGCGATTTCCCATCGCGGTA
TCAACTCCTTGAAGCGTTCGAGTGATATTTTCCCACCAGTTTGTGACAACAAATTTTCTG
TCATTCTTTTTATTTGTTCGTCGTTTAGTCCAGGGCTAAACAACGCATGATAAAATCTAA
ACAGCTCAATTCCCTTGAGATAACCTAATCTCTTTACGTCAAGAACATTGAAGAGGAACT
CCACCTTTTCCTCTGGGCTTCGATGAGAACTGATTTTGCTGAAAAACAGCACTGCTTCTT
TTGGATAAAACGTCTGATCACCTCCGGCAAGTTTTTGGGCAATGAAATGGGAGAGCGGGC
AGGCAGTAAGCTCCGGTATTTTCATCAAGTCATCGACAGAGACTCCGAAAGTCTCTTTGG
TAGACTGAGATTTGTCTAATTTGGAGTATCGGAGCTGAACCTCTCGCAGTTCTTTGAGAG
TAAATCCAGTTTGCTCCAAAAGGTCTCTTTGTTCTTCATCTGTGAAGTAGGATGCACCTT
GACCCTGATAAAAATTCAGATGTTATATTGTTGTGGGGAAAAGAAGTCAGCAATACCTAC
AATCGCTCACCATTATGAATGAAGAAAATGCAGAGCAGAATGCATGAAGGTATAGATTAG
TCTGAATTCATCTTCAATAAGTGAAACAAGACTGAAAATTATTTACCTGTTTTAAAACCA
AATTATATTGACAAAAGTAATATAACACTTTAATTTTTTTTAAATCCAAAATATTAGTTT
GATATTGCATTGCGAGTAACATGTGAGGAAAATTATGATGAATGAAAATCAACTGCAGTC
ATAAAATCAAGCAAGGAAGGAGCGGTATGGCCCAGGATATAGAATATTTGCATCAATAAA
ATTATGGCCCCAGAATTCTCTGTTACCATGAACCAAAGTGGTTGCTTCATCCTGTGCATT
TACCAACGGCAGTCTCTCATTTGCCCATTTGAACAAACTGCCTTCCACATTATAAAATTT
TACTTTGGAGAGAATCAAGTCAACGATGTCAAAGGAATCTACTGAAGGGATATCAACTGG
TGTTCCACGTTCTTCTCTCAGTCTTCTGCACTTTTTTTCAGCATAATTTAGAAATACCGC
CGACCTCAATCCAGTAGCACAATATCCTATTACATCAAAGCTTTCATTTGTCTTGCACTT
CTCTTTTAAGTATGATAAAAAATCCTCAAACTGTTTCCAACCAGGTTTATCATAGTCTAC
CCATTTGGCCGACATCAAATGGCTTATTTCATATTCTTCTTTTTCTCTGATGTCAATCAA
CAGAGTGTTTTTGTTGAATATCTCCGGTGAATTTTTGTTTTCACATTTTTTCAAATGTGC
ATTGAGTTTTACAGTAGAAATAAAGACAACTTTGGGAAAACACATACGAGTCAGAAGGAG
CATCAGCTTGAACAGGACAGGGTGTGGCGATTTTTCAGGCCTTCCAATGTCGCAAGGTTC
AATATTCTTCAAGAAGTCTAGGTTGAGATTCATGAGTGTTACTATAGTTTAAACTAGTAA
AAAAATCTAAAAATAACGCAGGAAAATTTACGAAAAGTAAAAGATTTCAAACGATTTTCA
AATATAAAATTTGAGAACAATATTAAAAATTTAAGTACAGAATAATAGTCCAGTGAACAT
TCCTGCGTGATGTAGTGCAATGAAATCACAGTTCAAATGAAATATCTTCAGTGGTAGTAG
TATACAGTGGTTACATTTGGCTTTACTGATTCAACAAATATTTTTACAAGGATAGAAAAC
ACTGCATAAAATATTCAAAACTAGGAATACTTATAGGCAATATTATTTCTTGAAGACATA
TCATGAATAAATGATCGAAGTATAAAATCCTTCCACATCGGCAGTCAGTAGTGTGGTCAT
TTCCAAAAAAGAGGACATTGCATATATGGTCTTTCCAGGGATGCAGGGATATTTAATAAT
ATCAGAAGAGGTAAGTTGGCAACTTAGCCTTAATTTAATATGCTGACATTGTAAAATTCC
CCGCTAGTTCATTTGGGGTGTTTTTTTCCTTTCACTTCCTATCCCTAAATCTGTTCTCTT
TATGCAACAACTTTCCCCATAAGACGTTATAGCAATGGACCTGTTCAGTTTTCTCATTAT
GAGCATCAACGATAAAACGTTTTTCATTTGCCCACTGAAATATCCCGCCTTTTAAATTAT
AAAGGTTCACTTTCGCATTTTTTGGAACGTCACACCCACTGTGTATGGCACTCTGTATCA
ATGCTGAAGATCTGTAGCCAATAGAACAATAAGCCACTACGTTGATATTAGTATTGTTCA
TAGAATTATTTGATAACCTAGTCAATTGCTCGTTCAGTACTTTTAATTTCTCGCGGACTG
GACTGCTATCGTTTATCCAAACAGCCTGGGATAAGCGACTAACGTCAAACTCTTTCTCTT
CTCGAATGTCAAGTAGTAGCAGTTGAGTGTCAGGTTGTGCGTCAAGTAATTTCTGTAAAT
CATCGGTTGAAATTTCTTTCACATCGCTGAACTTTTTTCGAACTCCAGCTAAAACAACTT
TCATACTGAACGTGGTATCCTCCGATTTTATAGGTTCTTTGCTCGATTTGCCAACTTTAG
AGTCAGCCATTTTTATAAGATATATAATACTTTATCAGTGAAGCAATTCATTGCAACAAA
ATGCTGTTCCAGTTTCTTCAACTTTGGTCCAAGAAACCGAGGGTAAAGTTCATCCAGAGG
TTGACTGGTCAAAAATTGAAGTGGGGCTGTCTCAACTTTGCAAGGTGTCTTTTTCATTTG
TTTCGTCAAGTTTTAGTTAAAAAAATAACAATGGCTTCCCAGCTTTCAAGAGTTATCTCT
CGATCGTTTAGCTGCAGCGCGATAAGAAACAATCTCGTACAAACTCCCATTCCGGTATAT
GGTATCTCTGGAACGTACGCTCACGCTCTTTATTCCGCTGCAGTCCAAGCAAAAGTAAAA
CCTAATGTGGCACAGGACCTAACTACATTACGAGAGATTTTGAAGAACCAGAAAGTGGCA
GATTATATGCATGATCCTTTTGTTGAAACGATTCAAAAACTTGGATTGTTGAAGGAGGTG
GCGAGCAAAGTGAAGATGACTGAGACGGTTGTAAACTTCTTTGGTGTAATGGCTGACAAC
AAAAGACTTAATTTAGTTGGAGAAGTTGCAGATGTCTACAGTCGCATCATGAGCGCAGAA
AGAGGAGAAGTTCCAGCTACTGTTACCACTGCTTCACCGCTGGATCCGACCCAGAAAAAA
AACTTGACAACGGCTCTCACGAAATTTTTAAACAAAGGTGAAAAGCTCATTCTTCACGAA
GAGGTTGACCCAGCTATCCTAGGAGGACTCATTGCTGACATCGGAGATAAGTATACCGAA
ATGAAATACATCGACATGTCCACAGCCAGCAAAGTCACGATGTACTCCGAGCTCATTCGT
CAAAATGTTTAACTCTTCTTCTTTTGTAGTTTGATGTTCCAAAATCCCAGTTCTTGTTGT
ATTTAGAAGAATTAAATGTTTTCTTCTTGGAAATTTAGTTGAACCAAAAACACTTGTACA
ATAAAATTGAATCTTACATGAGAA

InterProScan

PANTHER
ATPase_OSCP/dsu (IPR000711) - T[53-261] 1.7E-60
Hamap
ATPase_OSCP/dsu (IPR000711) - T[78-261] 15.679
SUPERFAMILY
ATP_synth_OSCP/delta_N_sf (IPR026015) - T[79-182] 6.15E-21
Gene3D
ATP_synth_OSCP/delta_N_sf (IPR026015) - T[81-174] 1.4E-21
TIGRFAM
ATPase_OSCP/dsu (IPR000711) - T[82-238] 5.3E-24
Pfam
ATPase_OSCP/dsu (IPR000711) - T[82-254] 1.4E-37
PRINTS
ATPase_OSCP/dsu (IPR000711) - T[82-101] 1.4E-13 - T[151-162] 1.4E-13 - T[162-176] 1.4E-13 - T[214-229] 1.4E-13 - T[229-247] 1.4E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ATPO_HUMAN 39.437 % 141 1.45E-41