- Transcript 'Harore.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S8.g00867.01.t
Possible name(s)
FGD6; PLEKHF1; PLEKHF2
Gene model
Location
S8 [700,238 / 704,164]
Amino acid sequence
Length: 308
>Harore.CG.MTP2014.S8.g00867.01.p
MDKLANTEINDRRIAHVESCFGNAGQQLVESGRVLVGEGVLTKLCRKKPKLRQFFLFNDI
LVYGSIVISKKKYNKQHVMQLKDIKVEEIPDADTIVRPDEEGQGDTLKNGWLIISPTKSF
AVYAQTAMEKQEWMSHMARGVEEQRMKSGVTTDPSNVAPPWIPDVEADQCMRCEKVTFNA
IQRRHHCRKCGYVVCKGCSSQKAFIPYQSSKPMRVCDACFQAIKENPNSIERISPAKKTQ
SFFSRSTRSKQNDHATDFPSKSDGSATEILPSFEDQHNQVRPAEMEKYMDSSDSSGESED
ENGNAKEN
Nucleotide sequence
Length: 3,458
>Harore.CG.MTP2014.S8.g00867.01.t
AGTCAGTAGACTTCTTTAGTTGTATTTTTCTCTTTAATTAGACTTCATCTAATTCTTGAG
TATATACAGTAACAACTCCATTATCCCTGTGGCAGTGTCATGTCAATTTCATTAAGGAGA
AATCTCAGTGGTCATATTGCAATAGGATTTTTGGGAAAATTATGGAATATTAAAGAATGT
TAATGTAATGTACAATCTGTCAGCCTTCTGGTTATTCTTTATTCTACTACTAGTTTAACT
GATCGGTGCAGTTACTGTGATTAATGGTGGCATTAAGAACTGAATAAAAGTACATTTGGT
TTCCATTGCTTAAATGTGCAATATTTAATTACAAATTCCCAAAAGCAATATTATTGAGTA
GACCAAAAACTATATCAAATATAATTATATTGCAGCAAGATATATCTTAGTTGTATCATT
TTGAAACAGAAATCAATGCGACAATGGATAAACTAGCAAATACAGAAATTAACGACAGGA
GAATAGCCCATGTTGAATCGTGTTTCGGAAATGCTGGACAGCAGTTGGTCGAATCTGGAC
GCGTGTTGGTGGGTGAGGGAGTGCTCACTAAACTGTGCCGGAAGAAGCCAAAACTTCGAC
AGTTTTTTCTTTTCAATGACATTCTCGTCTATGGTTCAATTGTGATAAGCAAAAAGAAAT
ATAACAAGCAGCATGTGATGCAACTGAAAGATATCAAAGTGGAAGAGATTCCAGATGCAG
ATACTATTGTCAGGCCTGATGAAGAAGGACAAGGAGACACATTGAAAAATGGATGGCTTA
TCATATCGCCAACCAAGTCTTTTGCAGTTTATGCTCAAACAGCAATGGAAAAACAAGAAT
GGATGTCACACATGGCCAGGGGTGTTGAAGAGCAAAGAATGAAATCAGGAGTGACAACCG
ATCCCTCAAATGTCGCTCCACCATGGATTCCTGATGTAGAGGCAGACCAGTGTATGCGAT
GCGAAAAAGTAACTTTCAATGCCATACAAAGAAGGCACCATTGCCGCAAGTGTGGTTATG
TTGTTTGTAAGGGCTGTTCGTCACAAAAAGCATTCATACCGTATCAGTCGTCGAAACCTA
TGCGTGTCTGTGATGCCTGCTTTCAAGCTATCAAGGAGAATCCCAATTCGATCGAGAGAA
TATCGCCAGCGAAGAAAACCCAGTCTTTTTTCAGTCGTTCGACCAGATCCAAACAGAATG
ATCATGCAACGGATTTTCCATCAAAATCTGACGGTAGTGCTACTGAGATCCTTCCATCTT
TTGAAGATCAACATAATCAAGTCAGGCCTGCAGAAATGGAGAAATACATGGACTCCTCTG
ATTCGTCAGGCGAGAGCGAGGATGAGAATGGAAATGCGAAGGAAAATTGAGGCTAATTTA
GTTCATTACAAATTAAAAACGTGAAAGCATGTGGTTTTTATGTTCTCTGGAAACAACCAT
TGCAAAACTTCTGCTCAATTGAATGTAAATATGGGAATATATGAGTAAAGTAAAGGTTTT
TTTCTCATTATATTTTTTATCGCAATTATTAAGTGATTTGTGGAACCTGTGTTCAAAAAA
TCCAATGATTTACAGCAGCAGTTTTATCAGAGAGCAATATGTTTTTGTTAGTTTAATTTG
TAGTATCATGAAATTTGTCAAATCAATTCAGCATTTAATGTAGCATTGCAATCGTTCTTT
CTTAAAATTGATTCTGTTTCCTGTTTATCGTCTCCATTGTCAAAAAACAACAAGTGGATT
GAAAAAATATTTTTTGATTTGAAAAATTGTGCCTTAATATTAAATCTACGCTTTGTGATA
TTTATTTTTTGATCTACTCGATACTATCAGGCATTTCTTCAATACAGGATGTACAGATAT
TTATAAAATATCTTGAGTACAGAAGCAAATGAATTACATGATGCATTTGACTTTATACTT
TTGTTTTTCCATTTTTCAAAGTTTTAAAACTCGGTTATGCCACTAAACTGTATACAGATA
TGTTCCACTGTACTAACAAAAACTGACACGCAAGTACAGGGTAATCTGGCCTCGAGGTCA
AATGAATCGACCTGTGAACAGTGGTCATGGAACAAATGTTACCAAAGGCTTTTTTTTGCT
AAGCACTTACTGGAGATATATTTACGTCAGTATCATTTCTATTCGTGAAATCAAATTCAT
TAAAACAGCAACATTATTTAGAAAATGCTGCTTACAAATTCATTAACGAAAATTCACAAT
TATTTACTAATGGTATGTATCGGTGAGTATGCCAGTTTGCAGTTTCTACAAATGACAAAC
CAGAAAAACACTTATATATATTTATAGGGAACCTATATATATTTTTATGTTCTTTATTTG
ACTGAAGGGTAATAAGTTATCCTCATTTTATTATTGTAATATGAGAATACTGTATACAGG
TTGAAAATCCTTTATCCGTAATCTCTATGACCGACAGTGTTTCGGATTTTTATATTTATA
TTTAGGATGGCTTGGGGACAAATTCTAATCTAAACATGATTTACATTTCCTAATATAGCT
AATTCATATAACTTGGTTCACAACCTGTTTAATCTAAAGGACTACGAAGTGAAATGCATT
TTCAGTATACAATACTTGCCCACTCTTTCAGCAACGAGTTGATATTGCTACGCTATTGTT
ATTATTCCCTTCGGTATCAGTGAATCGTTACGTAACATCCCACTTGACTTCTTTCGATTT
TGTATGATTTTCATAGTGGATACAATCAACATCCTCTCACAACACCGTAAATATGTGAGA
AATATTTCCTGTTGTACTCAGTAAATATGTACTTATTATGTATGCACATTACCATGTTCA
GTCCCGCTGTTTCTGTCATATATGTCAAACACAGCATGTTTGCCATAACCAGAATTATTA
GAGTCATAATTATTGAATTCCTTGTTGTCCTATTATTGCTTTAGAGTATTTGTTAATGGT
TAATCAAATGTGATATGCTGGATAATAGTGAATATACATACCATGCATAATGAAATTCAC
ATCTGCAGCATTACAGGTTTTCAGTCTGAATTGCTAATCGCGTTTACTGTATTCCGCACT
TAACATTTCAATGCATTTTATCATACAGCTACAGATTGTCTTTTTTATTGCGAACATACA
CATTGATCTGATTGGAATTAAAATAACTAGTTTAGGAATTGCATTGTGTGCTATTTGTTA
TCAATAAGAATTAGTCAGATCGTTTGCAAATGAATTGAAAAATTTATTGTTGCTGGATAT
TGTTTTTGATTCAGCAATATTTTACAGCAGTGTGTGCTCATAGATATTGCTAATGTGCAT
GGAGCACTGTAACTGTAACAGAGTTGCAAGCGAATGATGCGAATGATACACGTCTGTTGC
GCACAATAAATTATTAAACTTTTCCTGTAATACATTAATCATCAATATGAGCGCGGACCA
ATACTTTTACTAACAAACGCGCATGTTACTTTTTCATT
| CDD |
PH_Phafin (IPR037871) - T[6-137] 1.42968E-72 |
| Gene3D |
PH-like_dom_sf (IPR011993) - T[26-146] 6.8E-23 |
| ProSiteProfiles |
PH_domain (IPR001849) - T[34-142] 10.26 |
| SMART |
PH_domain (IPR001849) - T[35-144] 2.0E-10 |
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[151-239] 4.2E-24 |
| SMART |
Znf_FYVE (IPR000306) - T[156-225] 1.7E-30 |
| SUPERFAMILY |
Znf_FYVE_PHD (IPR011011) - T[159-231] 4.8E-22 |
| Pfam |
Znf_FYVE (IPR000306) - T[160-224] 3.8E-19 |
| ProSiteProfiles |
Znf_FYVE-rel (IPR017455) - T[164-224] 12.627 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FGD6_HUMAN | 36.199 % | 135 | 2.64E-35 |
| PKHF2_HUMAN | 58.929 % | 273 | 6.37E-92 |
| PKHF1_HUMAN | 51.121 % | 235 | 8.06E-77 |
