- Transcript 'Harore.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S8.g00004.01.t
Possible name(s)
AFG3L2; SPG7; YME1L1
Gene model
Location
S8 [230,187 / 232,440]
Amino acid sequence
Length: 750
>Harore.CG.MTP2014.S8.g00004.01.p
MLKYLSILPKSSQLGCWRCFTSRSIGRISGIVPARHIENSYTCRNLSVTRTPISNITSYS
RLFIELFGRSKHGNKRLLLDQNCTKFSTSAREYNRDQESSSSNPDDDRPDLKKIVFATIV
SSLAVVVLAYYTSQRNFAEPNELTLNSMTWKQFLEEVLPSGEVKEVHIAPSWNAHSFHVI
LHPGASLKGQTQTRNMKITNVMDVNQAESVIRDIEKRMRISPTNKVPIYHHNNLDLRKLI
AGSLLLVLMTAVSFFLFRMIRTISPKINLKGTEKDVRKVVTGIKFSDVAGCTEAKEEVME
FVHCLKNPERYQRLGAKMPRGCLLTGPPGVGKTLLAKAVATDAGVTFLFKSGSDFVEMIG
GLGAKRVRSLFKQARDEAPCIVYIDELDAVGKKRSDAGDYGGGNSERDQTLNQILVEMDG
MLSSQHDVVVMASTNRADVLDPALLRPGRFDRHIVLDLPTRGERKEIFEQHLKGLKLYES
PSKYSQRLADLTPGMSGADIANICNEAALFAAREKHMFIDSRHFEYAVERILAGSRRKTS
SLVEEERNIIAVHEAGHALAGWMLKHTDALMKVSIVPRTNSAMGFSQTLLKEKKLYSPSQ
LLDIMCMALGGRAAENIVFDSITQGAQDDLKKVTDMAYAQVKYLGFNPVVGNLSFAEEEE
SFVKPFSETFSQLIDSEVRKIITNAHEHTDRILKENRVKLDILTKELLKREVLDYGDIVK
LIGPPAYGDKTQIYSMNYGPLGSDFEKKED
Nucleotide sequence
Length: 2,253
>Harore.CG.MTP2014.S8.g00004.01.t
ATGCTGAAGTACTTGTCGATCCTGCCAAAGTCATCACAGCTAGGTTGTTGGCGTTGTTTT
ACATCCCGTAGCATTGGTCGAATATCTGGAATTGTTCCCGCACGCCATATAGAAAATTCG
TACACATGTAGAAACTTAAGTGTTACGCGTACACCGATTAGTAATATAACATCGTACTCC
AGGCTATTTATTGAATTGTTTGGACGCAGCAAACATGGAAATAAGAGACTATTACTTGAT
CAAAATTGCACGAAGTTCAGCACCAGTGCCCGTGAATATAATCGTGATCAGGAGTCAAGT
TCAAGTAATCCAGATGATGACAGACCAGATCTTAAAAAAATTGTCTTTGCGACCATTGTT
TCAAGTTTAGCAGTTGTAGTACTGGCATACTATACTTCACAGAGAAATTTTGCTGAACCC
AATGAATTGACTTTAAACAGCATGACATGGAAGCAGTTCCTCGAGGAAGTACTCCCAAGC
GGGGAAGTCAAGGAGGTACATATTGCCCCGAGTTGGAACGCACATTCCTTCCATGTGATT
TTGCATCCTGGTGCTTCTTTGAAGGGCCAAACCCAGACAAGAAATATGAAAATTACTAAT
GTCATGGATGTAAATCAAGCTGAAAGTGTTATAAGAGACATTGAAAAACGAATGAGAATA
AGTCCGACGAATAAAGTTCCAATCTATCATCATAATAACTTGGATCTTAGAAAGTTAATA
GCTGGTTCTCTATTACTTGTTCTCATGACTGCGGTATCTTTTTTTCTTTTTCGTATGATT
AGGACCATATCTCCCAAGATAAATCTGAAAGGGACTGAGAAAGATGTGAGGAAGGTAGTA
ACAGGGATAAAGTTCTCAGATGTTGCAGGTTGCACTGAAGCTAAGGAAGAGGTAATGGAG
TTCGTTCACTGTTTAAAAAATCCTGAAAGATATCAACGTTTGGGAGCCAAAATGCCACGT
GGGTGTTTGCTAACAGGACCACCAGGGGTGGGAAAAACTCTTCTGGCCAAAGCAGTTGCT
ACTGATGCGGGAGTCACATTTTTGTTCAAGTCTGGCTCCGACTTTGTTGAAATGATTGGA
GGCCTAGGGGCGAAAAGAGTGAGGAGCCTATTTAAGCAGGCACGTGATGAAGCACCCTGC
ATTGTATATATAGATGAACTTGATGCTGTTGGTAAAAAACGATCAGATGCAGGTGATTAT
GGCGGAGGGAATTCAGAGAGAGACCAAACACTTAACCAAATTCTCGTAGAAATGGATGGC
ATGTTAAGTTCTCAGCACGATGTTGTTGTAATGGCTTCCACAAACAGGGCGGACGTGCTG
GACCCCGCTCTTTTGAGACCTGGTCGATTTGACAGGCACATAGTCCTAGATCTCCCTACA
AGAGGAGAGCGAAAGGAAATATTTGAGCAGCATTTGAAGGGCTTGAAGTTATACGAATCC
CCTAGTAAATATTCTCAAAGATTAGCAGATCTAACTCCTGGTATGAGTGGAGCTGACATC
GCAAACATTTGTAATGAAGCAGCTCTGTTTGCTGCCAGAGAGAAGCATATGTTCATCGAT
TCAAGGCATTTTGAATATGCGGTAGAAAGGATTCTTGCTGGTTCACGGCGCAAGACTTCA
TCTTTGGTTGAGGAGGAACGAAATATCATTGCAGTTCACGAAGCAGGCCATGCACTAGCT
GGATGGATGTTGAAACACACGGACGCTCTGATGAAAGTATCCATTGTACCACGAACGAAT
TCTGCCATGGGATTTTCACAAACTCTGCTGAAGGAAAAAAAATTATATTCCCCCTCACAA
CTGTTAGATATTATGTGTATGGCACTAGGAGGTAGGGCTGCCGAAAATATAGTTTTCGAC
AGCATAACTCAAGGTGCCCAAGATGACTTGAAAAAGGTTACAGATATGGCTTATGCACAG
GTGAAGTATTTGGGATTCAATCCTGTTGTTGGTAATTTGTCTTTCGCTGAGGAAGAGGAA
TCGTTTGTCAAACCGTTCAGCGAAACATTTTCTCAACTAATAGACAGTGAAGTGAGAAAA
ATTATAACCAACGCACACGAGCATACCGACCGTATATTGAAAGAAAATCGTGTGAAACTT
GACATACTGACCAAGGAGCTACTAAAAAGAGAAGTGCTAGACTATGGAGATATTGTGAAA
TTGATAGGGCCTCCAGCTTACGGTGATAAAACGCAAATTTACTCCATGAATTACGGACCC
TTGGGTTCGGACTTTGAAAAGAAAGAAGATTAA
| TIGRFAM |
FtsH (IPR005936) - T[244-722] 2.8E-169 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[283-554] 1.95E-62 |
| SMART |
AAA+_ATPase (IPR003593) - T[318-460] 3.1E-18 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[323-456] 8.9E-38 |
| Pfam |
Peptidase_M41 (IPR000642) - T[522-720] 5.3E-61 |
| SUPERFAMILY |
Peptidase_M41-like (IPR037219) - T[544-725] 7.59E-54 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPG7_HUMAN | 50.411 % | 597 | 0 |
| AFG32_HUMAN | 45.605 % | 494 | 1.72E-164 |
| YMEL1_HUMAN | 36.591 % | 278 | 1.88E-82 |
