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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S8...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S89.g10656.01.t

Possible name(s)

LINS1

Location

S89 [38,771 / 40,756]

Sequences

Amino acid sequence

Length: 529

>Harore.CG.MTP2014.S89.g10656.01.p
MDLGKANYENLHKYFSDILTDFKKGENLGIPPDEISKYTEDLRSVINKILVLCKCSSICF
LESTMFMSLLDILKLLCEPVIDITSGSVLKHFFTNIFRDVSAQFIISLIDCQISEYCVQY
KIAEVLSYFISACSIVFCIPDYYQKLHIHLQESKTCSQLLCLGTIEKLCEFNENYSNLSF
INFLFTNVEFYFKNFFPRCLIEGSRQEQIFALRIYHRCLVTSNDNRIILIQHLKYVADNQ
NIILCDPVLCEKYLQFFKALFPFPGELDYRTSAIGPIAEGMVSKLLACMYIIPDGNKYFG
GVDIKSSNGHKTIVCGIAILFLKFACSIFELPFTTGRNILICDIWNCIVDLITVARDSQS
EGRLSERLIGLFLEQDDDLINMMLLHLHFSCSYLKWIPNHNERNANPDDITPHQLFLTLM
KHLSFDSSIMLDWLTSDETKFLQYFVKYLKFLASSSNDFLKACLEMDDLNKNKDSSYEEF
KKYSIQSENCLNDLTQSIKRLEGAGLFPYSAKPLLRLLEACIQLFLALK

Nucleotide sequence

Length: 1,590

>Harore.CG.MTP2014.S89.g10656.01.t
ATGGATCTTGGGAAAGCTAACTATGAGAATTTACATAAATACTTTAGTGACATTCTTACT
GACTTTAAAAAAGGGGAAAATTTGGGAATTCCTCCTGATGAGATTTCAAAATACACAGAA
GATTTACGATCAGTCATAAACAAAATACTTGTCTTATGTAAATGCTCATCTATTTGCTTT
TTAGAGTCGACAATGTTCATGTCATTGCTTGATATTTTGAAATTACTATGTGAGCCAGTT
ATTGATATCACAAGTGGTTCTGTTTTGAAACATTTTTTCACTAACATATTTCGTGATGTG
TCTGCTCAGTTCATTATTTCTCTGATTGATTGTCAGATTTCTGAATATTGTGTTCAGTAC
AAGATAGCCGAGGTTCTTTCCTATTTTATTTCTGCATGTAGCATTGTTTTTTGCATTCCT
GACTATTATCAAAAACTTCACATTCATTTACAAGAAAGCAAGACGTGCTCACAACTTCTT
TGTCTTGGTACGATTGAGAAGTTATGTGAATTTAATGAAAACTATTCCAACTTGTCTTTT
ATTAATTTCCTATTCACAAACGTTGAGTTTTATTTTAAGAACTTTTTCCCAAGGTGCCTC
ATTGAAGGTTCAAGACAAGAACAGATTTTTGCCCTTAGAATATATCACAGATGTTTAGTA
ACTTCTAATGACAATAGAATTATATTGATTCAACATTTGAAATATGTTGCTGACAACCAA
AATATAATTTTATGTGATCCTGTGTTATGTGAAAAATATTTACAATTTTTCAAGGCATTG
TTTCCTTTTCCTGGTGAACTTGATTACAGAACTTCTGCGATAGGGCCAATAGCAGAAGGA
ATGGTTAGCAAGTTGCTAGCTTGCATGTACATAATACCTGATGGTAACAAATATTTTGGT
GGGGTGGATATTAAAAGCTCTAATGGTCATAAGACTATTGTCTGTGGTATCGCAATTTTG
TTTTTAAAATTCGCATGCTCTATTTTTGAACTCCCGTTCACCACTGGACGAAACATTCTT
ATTTGTGATATCTGGAATTGCATTGTGGATTTGATCACCGTAGCAAGAGACTCGCAATCT
GAAGGAAGGTTATCAGAGAGGTTAATCGGTTTATTTCTTGAGCAAGATGATGATCTCATT
AACATGATGCTTCTTCATCTTCACTTCAGTTGCTCATACTTGAAATGGATACCGAATCAC
AACGAGAGAAATGCAAATCCCGATGATATAACTCCGCATCAGCTCTTCTTAACTCTGATG
AAACACCTTTCATTTGATTCCTCCATCATGCTTGATTGGTTGACCTCAGATGAAACAAAA
TTTTTACAATATTTCGTGAAATACCTGAAGTTTCTGGCATCATCCTCGAACGATTTTTTG
AAAGCCTGTTTAGAAATGGATGATTTAAATAAAAACAAAGATTCCAGTTATGAGGAATTC
AAAAAATATTCAATCCAATCAGAGAACTGTTTGAATGACCTCACGCAATCTATAAAGCGG
CTCGAGGGAGCTGGACTTTTTCCATACTCTGCTAAACCTCTTTTGAGGCTTTTAGAAGCT
TGCATACAATTATTTCTGGCATTAAAGTGA

InterProScan

PANTHER
Protein_Lines (IPR024875) - T[50-109] 9.5E-37 - T[340-525] 9.5E-37
Pfam
LINES_N (IPR032794) - T[358-463] 1.7E-19
Pfam
Lines_C (IPR029415) - T[490-521] 7.5E-11

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value