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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S8...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S879.g02211.01.t

Possible name(s)

ABRA; ABRACL

Location

S879 [11,010 / 12,899]

Sequences

Amino acid sequence

Length: 205

>Harore.CG.MTP2014.S879.g02211.01.p
MLVLRALVLSVATDDTKACNTACVAFNSISYEQIKPVRKVRNYHIVISSTKMLIMQSQVD
VQKSTVTSLSQKWDEHATEIEEKQKLNPFSGTYEADNRLRWVKGEPGYAQPVGTTAERGE
RAKKYINNEMSTLLRVIDALAKKTRDGSRTVTFGQLFNRYTSISSNLVGILIRARKRHLL
DFEGEMLWQRQDDDVIITLCEGALE

Nucleotide sequence

Length: 618

>Harore.CG.MTP2014.S879.g02211.01.t
ATGCTGGTATTGCGGGCATTAGTATTGTCTGTAGCGACGGACGATACTAAAGCCTGCAAT
ACTGCCTGTGTAGCGTTCAATTCCATATCGTACGAACAAATCAAACCGGTACGAAAAGTT
AGAAATTATCATATCGTCATCTCTAGTACCAAGATGCTAATTATGCAGTCACAAGTAGAT
GTTCAAAAGAGTACTGTAACATCACTGTCGCAAAAATGGGACGAACACGCGACGGAAATT
GAAGAAAAACAAAAATTGAATCCTTTCTCGGGAACTTACGAAGCTGACAATCGACTGCGT
TGGGTGAAAGGTGAACCAGGGTACGCCCAGCCGGTCGGCACAACAGCAGAACGCGGGGAA
CGAGCGAAAAAATACATCAACAATGAAATGTCGACTCTGCTGAGGGTAATTGATGCATTG
GCAAAAAAAACTAGAGATGGAAGTCGTACTGTTACATTCGGGCAGCTGTTTAACAGGTAT
ACAAGCATATCTAGCAACCTCGTGGGTATTCTGATCCGGGCACGCAAACGACACCTACTG
GATTTCGAAGGTGAAATGCTATGGCAACGGCAGGACGATGACGTCATAATAACATTGTGC
GAAGGCGCGCTAGAATAA

InterProScan

PANTHER
Abra (IPR026111) - T[54-200] 5.7E-46
Gene3D
Costars_sf (IPR038095) - T[118-201] 3.7E-32
SMART
Costars_dom (IPR027817) - T[124-200] 2.1E-35
Pfam
Costars_dom (IPR027817) - T[126-199] 4.9E-28

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ABRA_HUMAN 50.714 % 125 1.63E-34