Aniseed - Transcript Card

Transcript Model

Transcript Id

Harore.CG.MTP2014.S876.g04000.01.t

Possible name(s)

MYL1; MYL6; MYL6B

Gene model

Harore.CG.MTP2014.S876.g04000

Location

S876 [430 / 2,834]

Sequences

Amino acid sequence

Length: 249

>Harore.CG.MTP2014.S876.g04000.01.p
MHCASVKQIFKRRIPTFSKSYSRIHYSSNNFSVLISTRKIFKICIRMVSIILIIADFSEQ
MVEGVKEAFELFDKTGDTKIFYNQAGDVMRALGECPTNEDVLKFMGNPSKEDMNTKKLSY
EEFLPIFDKIIKESVKGTYEDFVEGLRVFDKDGNGTVMGAEIRHVLTTLGKNIRCIINIY
ISFLRKIDKKIQVEFLTTRLSANSCWNNHKKHCKFRSVRQIFILHFVGEEYYQVFTHKCP
LVLVHNGII

Nucleotide sequence

Length: 750

>Harore.CG.MTP2014.S876.g04000.01.t
ATGCATTGTGCAAGTGTGAAACAGATCTTTAAAAGAAGAATCCCCACGTTCTCAAAATCA
TATTCGAGAATTCATTATAGCAGCAACAACTTCAGTGTTTTAATATCTACCAGAAAAATT
TTCAAAATCTGCATAAGAATGGTTAGTATAATATTAATAATAGCTGACTTCAGTGAACAA
ATGGTTGAAGGTGTCAAAGAAGCTTTCGAGCTTTTTGATAAAACCGGTGACACCAAAATA
TTTTACAATCAAGCTGGTGATGTGATGAGAGCTTTGGGAGAATGTCCGACCAACGAAGAT
GTATTGAAGTTTATGGGAAATCCAAGCAAAGAAGATATGAACACTAAAAAATTGTCCTAT
GAAGAATTCCTTCCAATCTTCGACAAAATCATCAAAGAATCCGTCAAAGGAACTTACGAA
GATTTTGTTGAAGGTTTGAGAGTTTTTGATAAAGACGGGAACGGTACAGTTATGGGAGCT
GAAATTAGACACGTCCTTACAACCCTCGGTAAGAATATAAGATGTATCATTAATATCTAC
ATCTCTTTCTTACGGAAAATCGACAAGAAAATTCAAGTGGAATTCTTAACTACGAGGCTT
TCAGCAAATTCTTGTTGGAACAACCACAAAAAGCATTGTAAATTTCGATCCGTCCGTCAA
ATATTTATTTTACATTTTGTGGGGGAGGAATATTATCAAGTTTTCACCCATAAGTGCCCA
TTAGTTCTTGTTCATAACGGAATAATATAA

InterProScan

SUPERFAMILY	EF-hand-dom_pair (IPR011992) - T[57-173] 1.74E-23
ProSiteProfiles	EF_hand_dom (IPR002048) - T[60-95] 9.688 - T[137-172] 10.887
SMART	EF_hand_dom (IPR002048) - T[64-92] 3.6 - T[141-169] 3.0

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
MYL6_HUMAN	61.667 %	160	5.22E-50
MYL6B_HUMAN	53.175 %	153	1.75E-46
MYL1_HUMAN	55.906 %	153	1.73E-46