- Transcript 'KH2012:KH.S588.6.v1....' >
- Transcript 'Harore.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S86.g14947.01.t
Possible name(s)
AF241726.2; TSPAN6; TSPAN7
Gene model
Location
S86 [73,977 / 80,190]
Amino acid sequence
Length: 243
>Harore.CG.MTP2014.S86.g14947.01.p
MVSKRMKTTPAMACLKTLLSIFSIIFLAIGFSLIGFGAYAKMKLQAYLNVSTINFTNAPF
AMIGIGAFIVVVGIMGCCATVKGNTCLLRTLPNNFISYFTLQYGVLLAVVFICELGGAIV
AIIFRGKVDGAFHDGMTNAITNYATDAKYKDSVDNIQTTVHCCGVENYTDFASLSSAYPQ
NTVPLSCCSDQDWCKSHLYQGEANKVNLSSADNPTEYIYQAIIGIILACCLASTINANKY
ELV
Nucleotide sequence
Length: 2,042
>Harore.CG.MTP2014.S86.g14947.01.t
TTTCTTTAGAACTAGATTGTAAATTGACAAGCCTTTGAGTAAGAACTAAGAAGTGAACTG
CATTCAATTGATCTACTTAAAATTTCAAAATGGTTTCGAAACGAATGAAAACTACACCGG
CCATGGCCTGTTTGAAGACTCTGCTTAGTATCTTCAGTATTATATTTTTGGCAATTGGAT
TCTCCCTAATCGGATTCGGTGCTTATGCAAAGATGAAACTACAGGCGTACTTGAACGTAT
CCACAATCAATTTTACAAACGCTCCTTTTGCTATGATTGGTATTGGCGCTTTTATAGTCG
TTGTGGGCATCATGGGATGCTGTGCCACAGTAAAAGGAAACACCTGTCTCCTACGAACAC
TACCTAATAATTTTATATCATATTTCACTTTGCAGTATGGTGTTCTGCTGGCTGTTGTCT
TTATATGCGAATTGGGTGGAGCGATCGTCGCGATTATATTCAGAGGGAAGGTCGATGGTG
CTTTCCATGATGGAATGACAAACGCAATAACAAACTATGCCACCGATGCTAAATATAAAG
ATTCAGTTGACAACATTCAGACAACGGTCCACTGCTGCGGAGTAGAAAACTACACAGACT
TTGCCTCTCTGTCTTCAGCTTATCCTCAAAACACAGTTCCATTGTCCTGTTGCTCTGACC
AAGACTGGTGCAAAAGTCATTTGTACCAGGGTGAGGCAAACAAAGTGAATCTCTCATCTG
CTGACAATCCGACAGAATATATCTATCAAGCGATCATTGGAATAATTCTCGCCTGCTGTC
TCGCTTCCACTATCAACGCTAACAAGTATGAACTAGTGTAAGAGTCATTAACCTCTCTCT
TTTCCCAGAAGTATATTATCTTATATAAATTAAGTGTATTTTATTTTTCCGTGTTGTTGG
TTTAGCAGTCTGGGTGGTAATAGGTTTTTCTGCAGTATGGTTTAGGGCAGAATAATATTT
AATGGAAACACTCTTCATCCATACTGGCAAACCGTATAATAAATGTGGCCTTTCAAATGT
AGTAAATTCTGTTTAATGTCGCAATAAACCAATAAGACTCGGTTTGTTAGTTCTCATAGT
GGTCAAGGTTGCGATTCTTTTTTGCCACACTGTATGTTGTTTATCTGAGCAATTGGTAGT
TTTTGGTTCAAATAGTATTAAGTATTAAAATTTCATACTTGCAATAATATAAGGGAATAT
GTGTGAAAGAAACTTCAGTAGTATTCTGTGTATGAATGTGCAATTGTTATATCAGCTTCA
ATTTACCATGATTTATAAGAAGAGATATATAGTAACAGTCGAAAATTCTAAAATAATTAA
CATAAACCTCATTATCTTGTGTGCAGTATCTGTACTAGTCCAGTTGGCATTCTGAGTGGT
CATTAGCCATGAGATTATAGTAACAATTGTGGTATTCTTTCAAAATCAATAATTTACTAA
TAAGAATTCTTCATCTTTCCCTTTTATTGTATTGTGCAAATCATATTAAGTATTTCTAGT
CCCATAACGTATATATATATATATATGTGATTGTTAAGTGTAAAAACAAGGATTTCATTA
TAAGGTAAAAAAATTGTTCCTTCTACTAACTGATAGGAGTATTATTTCATCTTAATAATT
TGAATCCATGAATCCTACAATAATATCATGCCGAAATTAAATTATTGCACAAATTAGATA
TAGAATAAATTTATGGTTAGGGAGAAGGGCAGGTCTCGTCAGTGACCAAGGGTTCGATTC
TCGCCTATGATAAATGTTTGATAAATAATACTATAGCACAGTACCTTATGTGATGATATT
ACACATGTTTGATGACTTACTTAAATTTCTCTAGAAAAGTTTATAGATTCAAATTCTGAT
TTTTTACTTTCTCAAATCTTTCTACTGTTTGTGGTGTAGTAGTCTTCTATACCTATTCTG
TTAACTCAGCGTACTCAGTGATAAGAAATAAAGGTTACAGTTCAATTGCATTTGGGTTTA
GTCGTAGTTTGTCCTTGTGCATGTAATTGTAGTGGTGCGTAATAAATCGTTATCACTCAG
CA
| PIRSF |
Tetraspanin (IPR000301) - T[6-237] 3.2E-40 |
| Pfam |
Tetraspanin/Peripherin (IPR018499) - T[15-232] 3.7E-29 |
| PRINTS |
Tetraspanin (IPR000301) - T[17-40] 9.5E-12 - T[55-81] 9.5E-12 - T[209-235] 9.5E-12 |
| ProSitePatterns |
Tetraspanin_CS (IPR018503) - T[66-88] . |
| SUPERFAMILY |
Tetraspanin_EC2_sf (IPR008952) - T[123-200] 1.44E-13 |
| Gene3D |
Tetraspanin_EC2_sf (IPR008952) - T[124-207] 7.4E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TSN6_HUMAN | 31.395 % | 137 | 1.16E-39 |
| TSN7_HUMAN | 33.588 % | 153 | 5.58E-46 |
| CD63_HUMAN | 26.482 % | 95.9 | 5.18E-24 |