- Transcript 'Harore.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S81.g00046.01.t
Possible name(s)
EFS; PEX13; SH3D19
Gene model
Location
S81 [18,272 / 19,885]
Amino acid sequence
Length: 405
>Harore.CG.MTP2014.S81.g00046.01.p
MSDLPPPKPWEINRSSSSANIYGPLHSGTSNTVNDSRPTAIPPPVPARPSQRVNTPPNYQ
SNYGSFGSYPSYGGGYSGMYGGGMYGGMYGNSMNGYNRPYSNTGGFSRQAEDSTRQAFQS
VESIVRAFTSVSAMLESTLGAVYSSFRAVLDVADHFSRVKATFTDILSSITLFRLVRFLY
RRARAFLNLTPCDDAWDTANAENAAKFTQRRKSRSWPILLFISVVIGGPYLIWKLLSGAQ
NSAPKPKMKWANGEADHVVARAEYSFESENDDELSFRVGDVLHLAPKEQQSSIRDWLLAS
VDGEKVGMVPANYVKILGKRKGRSVEDNISNLADQGSQVKLQYCHSYRRFVCLIICKLFL
FFNHANLVERGGRTSYYSSQGSQYPSEKLIYLAESLQTKLDNIIL
Nucleotide sequence
Length: 1,218
>Harore.CG.MTP2014.S81.g00046.01.t
ATGTCTGATTTACCCCCACCTAAGCCATGGGAAATCAACAGGAGTTCTAGTTCTGCTAAC
ATCTATGGACCCCTTCATTCCGGAACAAGTAACACTGTTAACGATTCAAGACCCACTGCG
ATCCCCCCTCCGGTTCCAGCCAGACCCTCTCAACGAGTGAATACCCCACCGAACTACCAA
TCGAACTATGGAAGTTTCGGGAGTTATCCGAGTTACGGTGGTGGGTACAGTGGCATGTAT
GGAGGAGGGATGTATGGAGGGATGTACGGTAACAGTATGAACGGATACAACAGACCTTAT
TCCAATACCGGGGGCTTTTCTAGGCAAGCTGAAGACAGCACCAGACAAGCATTTCAGTCT
GTTGAGAGCATCGTGAGGGCATTCACATCGGTATCAGCAATGCTGGAATCTACTCTTGGT
GCTGTTTACAGTTCATTCAGAGCTGTTTTAGATGTCGCTGATCATTTTTCAAGAGTCAAA
GCAACATTCACAGACATTCTATCTTCCATAACTCTATTTCGTTTGGTAAGATTCCTCTAC
CGCCGTGCCAGAGCATTTCTAAACCTAACTCCGTGCGATGACGCCTGGGACACGGCCAAC
GCTGAAAATGCTGCTAAATTTACTCAAAGAAGAAAATCTAGGTCATGGCCCATCTTACTG
TTTATATCTGTTGTAATCGGAGGTCCTTACCTAATATGGAAGTTGCTTAGTGGAGCTCAA
AATTCTGCACCCAAACCAAAAATGAAGTGGGCCAATGGAGAAGCAGACCATGTTGTGGCA
AGAGCGGAATACAGCTTCGAATCTGAAAATGATGATGAGCTTTCTTTTCGGGTGGGTGAC
GTACTCCACCTCGCACCGAAAGAGCAACAATCTTCAATTCGAGATTGGTTGCTGGCGTCT
GTCGACGGAGAAAAAGTTGGTATGGTGCCGGCAAACTATGTTAAAATTTTAGGAAAAAGA
AAGGGAAGGTCTGTCGAAGATAACATCAGTAACTTAGCAGATCAAGGAAGCCAAGTGAAA
CTGCAATATTGTCATAGTTACAGAAGATTTGTCTGCCTAATAATTTGCAAGCTGTTTTTA
TTCTTCAATCACGCTAACTTAGTGGAAAGAGGCGGACGAACATCATATTATTCTTCACAG
GGGAGCCAATACCCTTCTGAGAAATTAATATATCTAGCTGAATCACTACAGACAAAACTA
GATAATATTATATTATGA
| PANTHER |
Pex13 (IPR035463) - T[3-326] 4.5E-87 |
| Pfam |
Peroxin-13_N (IPR007223) - T[106-236] 1.7E-38 |
| SUPERFAMILY |
SH3-like_dom_sf (IPR036028) - T[246-321] 1.09E-16 |
| ProSiteProfiles |
SH3_domain (IPR001452) - T[255-319] 13.286 |
| SMART |
SH3_domain (IPR001452) - T[258-318] 2.0E-14 |
| PRINTS |
SH3_domain (IPR001452) - T[258-268] 1.1E-5 - T[272-287] 1.1E-5 - T[305-317] 1.1E-5 |
| Pfam |
SH3_domain (IPR001452) - T[262-315] 8.7E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PEX13_HUMAN | 49.498 % | 272 | 3.6E-88 |
