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- Transcript 'Harore.CG.MTP2014.S7...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S7.g15524.01.t
Possible name(s)
ANKS3; FANK1; RNASEL
Gene model
Location
S7 [562,976 / 571,604]
Amino acid sequence
Length: 576
>Harore.CG.MTP2014.S7.g15524.01.p
MLYIRHIIECNVRDSFLHVVVCAFVRPGRRMSVQDSDSFQESGIFNNSLSMWRGIKHQNR
DGSIIYEDDEDFEPIPLDLHTAASIGEDDIVKDILERSKHKINALNRGGWSPLMYAAYMG
QENTINLLLDCGADPNSRTRQGSTSLILAAMCGNFTVMPLLLQKGGDLEGKDNHGWTPLF
HAASCGHQQTTEYFINAGADCEVVEPKHGLTPLMEAAASGHEVIVHQLLLRGVDKARVDN
HGDSARTIAFEYGHMKVASLIDNYKPSRTKGVKSYHNTNSHQKAPPISQGTNKYSSSGPS
IHEGPRKFAEMTGLGEDGIPKPNEVMPSFLQQPSPQVIESVQPRQAESRWMGPKDLPTLL
EEIGCSKHLHVFKEQDIDLRIFLTLTEAELKEIGIKLFGPRRRMINIIAEINNGVQASLI
DRTELVYCDSLLVKLRDMEDKLKNQQDMVSELTAQLAQERQLRSVAESVLMDQKETRSSV
HRSMEKLTTEHSRLIRIADQLRSCSARANQSKARHQSTHNTTLPNKLIDQEIMKISPEFD
TTLHHIRDHLLEMQRILQRSTSMGSIKSDSQWKDRG
Nucleotide sequence
Length: 3,953
>Harore.CG.MTP2014.S7.g15524.01.t
ATGTTATACATTCGTCATATAATCGAATGTAATGTTCGTGATAGTTTCCTACATGTAGTT
GTATGTGCTTTTGTCAGACCAGGGAGGAGAATGTCGGTCCAAGATAGTGATTCGTTCCAG
GAATCTGGAATCTTTAATAACAGCCTTTCAATGTGGAGAGGAATAAAGCACCAGAATAGA
GATGGAAGCATCATTTATGAAGATGATGAGGATTTCGAACCTATTCCGCTTGATCTACAC
ACTGCTGCCTCTATAGGAGAAGACGATATTGTTAAAGATATTTTAGAAAGAAGTAAACAC
AAGATTAATGCCCTCAACAGAGGAGGTTGGTCACCTTTGATGTATGCCGCCTACATGGGC
CAGGAAAACACTATTAATTTGCTTCTCGATTGCGGAGCCGATCCTAACTCACGAACACGA
CAAGGCTCTACATCTCTTATACTTGCTGCTATGTGTGGAAATTTTACAGTCATGCCTCTA
CTGCTTCAGAAAGGCGGAGACTTAGAAGGTAAGGACAATCATGGTTGGACTCCACTATTC
CATGCCGCCAGTTGTGGTCACCAGCAGACAACAGAATATTTCATTAATGCCGGCGCAGAT
TGTGAAGTAGTAGAACCCAAGCACGGCCTGACTCCGCTGATGGAAGCTGCAGCTTCGGGT
CATGAAGTTATTGTCCATCAACTTCTTCTAAGGGGTGTAGATAAGGCAAGAGTGGATAAC
CATGGTGACTCAGCTAGAACAATAGCATTTGAGTACGGTCACATGAAGGTCGCAAGTCTA
ATCGATAATTATAAACCTTCAAGAACTAAAGGTGTGAAATCATATCATAACACGAACAGC
CATCAGAAGGCTCCACCCATCAGTCAAGGAACAAATAAGTACAGTTCCTCTGGTCCTAGC
ATCCATGAAGGGCCTAGAAAATTTGCAGAAATGACAGGGCTCGGAGAAGACGGCATCCCG
AAGCCCAACGAAGTGATGCCTTCGTTTCTGCAACAGCCGTCACCTCAAGTTATCGAATCG
GTGCAGCCTAGACAGGCAGAATCTCGGTGGATGGGACCAAAGGATTTACCAACTTTACTG
GAGGAAATTGGATGCAGCAAACATTTACATGTTTTCAAAGAGCAAGACATCGATCTTCGT
ATTTTTCTTACGTTGACAGAAGCCGAGTTGAAGGAAATAGGAATAAAGTTGTTCGGGCCA
AGAAGGAGAATGATTAACATCATTGCAGAAATCAATAACGGTGTTCAAGCAAGTCTCATT
GATCGAACTGAGCTGGTATATTGTGATTCATTGTTAGTCAAACTAAGAGATATGGAAGAC
AAATTGAAAAATCAACAAGACATGGTCAGTGAACTAACTGCTCAACTTGCCCAAGAACGT
CAATTACGTTCAGTTGCAGAGAGTGTATTGATGGATCAGAAAGAGACAAGGTCATCTGTA
CACAGGTCAATGGAAAAACTAACTACTGAGCATAGCAGGCTTATTCGAATCGCAGATCAA
CTGAGGTCTTGTTCGGCGAGAGCAAACCAGAGCAAAGCTCGCCATCAGAGCACTCATAAT
ACTACACTGCCGAATAAACTGATTGATCAAGAAATAATGAAAATAAGTCCGGAATTTGAT
ACTACATTGCATCATATAAGAGATCATTTACTGGAAATGCAAAGAATTTTACAGAGATCA
ACTTCAATGGGATCCATCAAATCAGATTCACAGTGGAAAGACCGAGGCTAAAATATACTG
AAGATTGTACCGTAATATTTTATTTTGTTTTCTATTGTCAAGCAAGAGACATTCGCTACT
GATGGGGTGGATTGGTGTTTGAAACGGTATGATACAATTTACTGTCTCCCTGTGATATGC
ATATTGCACTGATATTGCAAAGAATCAACAGCATCAGGTATAAAGATTGCCTTGAGTTCT
GCATTAAAATTTAATCTCAATATGGCGGGACATATTAAAAGAATTGAAACTTTAAACTAG
TCGTAAACTCAACAATGGTTAAAAAATGGTGCTTCCTTTTTTGCTGTAAAGAATTGCCAT
GCCTGTACCGACATCACAGGGGTTCTATAATTTTATTTTTCACACCCCTCGAATTTCAAT
GACAACCTAGCATTTTGGACCTCCCACATTTCTGGATGAAATTCATCGGTAAGAATTTAA
ATGAGGATATTATTCAATAAACATTATGCTGAATGAATTCAAAAAGTCATATAATAACAT
TACCAGCTCTATGGAATGTCCTTGGTAACGAAAAATAAGAAAACAAAAATCTTTAATGAA
TTGGCAAAAGTAATGACATGGTCAATCTTGTGTATAGGTAGACCATTTATTTTTGATTAA
GAAATTCTTGAGGGTGATGGTACATCAAAATATACTGTTAGCGTTGTATAGACTGCATTT
CTAGTGTACATGTCCAACGTAATGTTTTTGTGGGTTGGTGTAGTATATTAAAAATATGGG
CCGGATTATAATCTTGGAAAATATCGAAAAGGTTTTATCGCGATATTTATATACATTCAT
GGATACTGTATATCGGAATGTGACAGCACAATATATGGTAAGTTAACTGACAGTAAGTTC
GTGAATCTGCTGAAGGCACTGCAGCACAACTTGTCATATCGTAGCCATTATCACCATGCA
CAGATTTCTTATGGAACTGTTACTCGTGTATAAGTCTACCCCCTGTTTTTGCCTAAATAT
TTAGTTTTAGAACTTATACACGAGTATACAGCAACTTGGGCTACTGTATTATGTGGTCCA
CCTGAAGAGTTAAGATTGGAATCTACAATTAAAATAACTAAAAAGTGAAAAAAACATAAC
CTTGACTGTAATCCTAACCTGAATTCCCAATTACGAGGTGGACAGCATAGTATACTAGCA
TTGTAATTTTCCCGTTTCTATGGTTGCTGACATTATTGCTATTGCACTTGTACTCTCTAG
CGTTATATAACATCGCGTAACAGTTCTCTAAAGGTAGTGGTGCCAAAAATTCCAGTGCCG
AGCGGTTTTGGAAATATGTCGTTCGTATAATGCTGTCACAGAGGTCTGAGAAAGTGTGCA
AAGAGGGGCCATGGAATTCGGTTATTGCTTTGTTGCTTCAACTCTTCTTTCTGTATTATG
TTAGGGAAATGAATTCGTTTATGTGTAGTATTTTCTTCGGTTCGTTTTTATACATTGCAC
TACTACTAAAGTAAAGTTTTTGTTATTATTGCATTACTCTGATGTCAAGTCGATAATGTT
AACTAATCAAATCGAAATACATATTTTTTCTAGTTTTTTTCCATCTCAATATATTCATAC
TTCGATACACATGCAAATTAGAGCATTCATGCTGAAGAAAACAATGTTAAAAATATTAAA
TGTGTCATAAGTTATCAGCTAAATCCAGCGTATAATATATGGAACACGTTCTTTTCAAAA
TCAAACACTATGTCGTGACTTTCAGCTGTTTCCTTTACAGTTGCGATAGTTGATAAATCT
TCTACAGAAAAAGCATTATCTGAAATTTAGCCTTCCCGTTTTTTTATGATCTGTATACGA
GCACCTTTATCGCAGTGGAGGTTTGATCAGCAACTGTACAATAGTACAAAGTCGTCAAGC
AACAGCAAGAGCAACGGTAATTCTGAATTGCTACAATATGTAATAGATGATATGTACAGA
AATTATAGATATATAAATGTAACCACTCACAGGTGAATATAACGGCGCCTGTTGAGCTTC
TCGGAACACATTCAATTAAAACACAAATACCTTCAAAATTATAAAGCTTTGAGCTTGGAA
TTTTGATTTATACCAATGTAAAATAGACGAGGTGAGGCCCTCGAAGATAAAATGCTAACG
AGTAAGGTGAACTGTGATTTCAAGATACTTATGCATAATACCAATGCAGAGTTGGACTCA
TTCTTTTGATGTGATTGTCAAAATTAAATTGGAGCTAAGCAGCGGAATGTTTT
| SMART |
Ankyrin_rpt (IPR002110) - T[74-104] 2200.0 - T[108-137] 3.8E-5 - T[141-170] 2.0 - T[174-203] 6.9E-4 - T[208-237] 0.0063 - T[241-270] 360.0 |
| Gene3D |
Ankyrin_rpt-contain_sf (IPR036770) - T[77-175] 1.6E-27 - T[176-272] 5.5E-19 |
| SUPERFAMILY |
Ankyrin_rpt-contain_sf (IPR036770) - T[79-263] 8.71E-46 |
| ProSiteProfiles |
Ankyrin_rpt-contain_dom (IPR020683) - T[79-261] 44.219 |
| CDD |
Ankyrin_rpt-contain_dom (IPR020683) - T[103-229] 1.13771E-34 |
| ProSiteProfiles |
Ankyrin_rpt (IPR002110) - T[108-140] 11.861 - T[141-173] 11.114 - T[174-206] 9.538 - T[208-240] 10.392 |
| Pfam |
Ankyrin_rpt-contain_dom (IPR020683) - T[131-203] 9.9E-11 |
| SMART |
SAM (IPR001660) - T[348-414] 8.7E-9 |
| SUPERFAMILY |
SAM/pointed_sf (IPR013761) - T[349-412] 6.48E-12 |
| ProSiteProfiles |
SAM (IPR001660) - T[351-414] 10.415 |
| Pfam |
SAM (IPR001660) - T[354-408] 3.7E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ANKS3_HUMAN | 43.493 % | 247 | 1.42E-73 |
| FANK1_HUMAN | 30.89 % | 94.7 | 3.98E-21 |
| RN5A_HUMAN | 35.119 % | 90.5 | 6.14E-19 |