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TRANSCRIPT CARD

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  1. Clone 'citb035f22' > 
  2. Transcript 'Phfumi.CG.MTP2014.S7...' > 
  3. Transcript 'Harore.CG.MTP2014.S7...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S769.g11613.01.t

Possible name(s)

RPS19

Gene model

Harore.CG.MTP2014.S769.g11613

Location

S769 [4,177 / 7,146]

Sequences

Amino acid sequence

Length: 176

>Harore.CG.MTP2014.S769.g11613.01.p
MSPRCVEEQGIQSGQWAYQTGRKRRGTKPCHFSRGSSSIARKVLQSLEGVKMIQKDDIGY
KFFLDASFLFRVAGGLPTKVNVTWTELLDKWLKLLLKAAFNNDSVLIKSKLKVPEWVDVV
KTAVRKELAPVDSDWYYIRCASTARHLYIRGGVGVNSFCKIYGGELVNITDFSKGA

Nucleotide sequence

Length: 531

>Harore.CG.MTP2014.S769.g11613.01.t
ATGTCTCCTCGCTGTGTAGAGGAGCAGGGTATTCAAAGTGGTCAATGGGCCTATCAAACG
GGACGAAAACGCAGAGGGACAAAGCCTTGTCACTTCAGTCGTGGTTCCTCATCTATTGCT
CGCAAGGTTTTGCAGTCACTTGAGGGTGTTAAAATGATCCAGAAAGATGATATTGGGTAT
AAATTTTTTCTTGACGCATCATTTCTTTTCAGGGTGGCAGGAGGATTACCTACCAAGGTC
AACGTGACATGGACAGAATTGCTGGACAAGTGGCTGAAGCTGCTGCTAAAAGCCGCCTTC
AATAATGACAGTGTATTAATAAAAAGCAAGTTGAAAGTTCCAGAATGGGTTGATGTTGTT
AAAACCGCGGTAAGGAAAGAACTTGCACCAGTGGACTCAGACTGGTATTATATTCGATGT
GCGTCGACCGCAAGGCACCTCTACATTCGTGGTGGAGTCGGTGTCAATTCATTTTGCAAA
ATCTATGGAGGTGAGCTTGTAAATATTACTGATTTCAGCAAAGGGGCTTGA

InterProScan

Gene3D
Ribosomal_S19e_sf (IPR038111) - T[6-63] 7.1E-9 - T[103-174] 2.6E-25
Pfam
Ribosomal_S19e (IPR001266) - T[10-56] 2.7E-8 - T[108-165] 5.9E-24
PANTHER
Ribosomal_S19e (IPR001266) - T[20-59] 4.6E-30 - T[108-167] 4.6E-30
SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[20-58] 1.63E-7 - T[109-165] 2.99E-22
ProDom
Ribosomal_S19e (IPR001266) - T[21-59] 3.0E-9 - T[98-164] 2.0E-20
ProSitePatterns
Ribosomal_S19e_CS (IPR018277) - T[29-48] .
SMART
Ribosomal_S19e (IPR001266) - T[104-174] 7.1E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS19_HUMAN 62.857 % 93.6 6.98E-25