- Transcript 'Harore.CG.MTP2014.S7...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S73.g08696.01.t
Possible name(s)
RDH11; RDH12; RDH13
Gene model
Location
S73 [165,736 / 167,867]
Amino acid sequence
Length: 410
>Harore.CG.MTP2014.S73.g08696.01.p
MHYSEGLVLYSYISHGECSLHIRENSSMLLELFTLLKYMRCSTTLSRVHKLSNVFIPPLS
TAIDQYVFNPLFSTLSAQICASTHSEVMTSSKQSASAKGGWVTSDVYLKEKSVLITGGNS
GIGFETAVDLARREATVIIACRDESKGENAVTEIRNITGSKTVFFKHLDLSSFQNIRKFA
KEFIDTETRLDILINNAGIMLCPQSTTEDGFETHFGVNHLGHFLLTNLLMDLLKKSSPSR
IITLSSVMHTELYNAYIHWDDLNLKKSYFPRDAYSQSKLMNVLFSRELSKRLTGTGVTTY
CVHPGLVRTNLLRHVGTNSSCWDFLFSFVTKTTRRFWKTPEHGAQTSIYCAIAPEIENVS
GKYYNTVLFQPYSDCHEETEARLGRDDDAAKRLWEITQEIISSVNIDEKD
Nucleotide sequence
Length: 1,233
>Harore.CG.MTP2014.S73.g08696.01.t
ATGCACTATAGTGAAGGTTTGGTACTTTACAGCTATATATCGCACGGGGAATGCTCGCTC
CATATTCGTGAGAACTCTTCTATGCTGCTTGAACTTTTTACCTTGCTGAAATACATGCGT
TGCAGTACTACATTAAGTAGAGTTCATAAACTCTCAAATGTTTTCATTCCTCCGTTGTCT
ACAGCTATTGATCAGTATGTGTTTAACCCACTCTTCTCTACGTTATCGGCACAAATATGT
GCATCTACGCACTCGGAAGTAATGACTAGCAGTAAACAATCAGCCTCGGCTAAAGGAGGA
TGGGTAACTAGCGATGTCTATTTAAAAGAAAAATCAGTTTTGATAACTGGAGGAAACTCG
GGAATCGGTTTTGAAACTGCTGTAGATTTAGCAAGGCGTGAAGCAACGGTCATAATAGCA
TGCCGTGACGAATCGAAAGGGGAAAATGCCGTAACTGAGATTCGAAACATAACTGGATCG
AAGACCGTTTTCTTCAAGCACTTGGACTTATCTTCGTTTCAAAATATTAGAAAATTTGCT
AAAGAATTCATTGATACGGAGACACGGCTAGATATTCTAATTAACAATGCAGGTATAATG
TTGTGCCCTCAGTCAACAACCGAAGATGGATTTGAAACACATTTCGGTGTAAATCATCTT
GGCCACTTTCTCTTGACCAATCTATTAATGGATTTATTAAAGAAAAGTTCGCCTAGTCGG
ATCATTACACTGTCGTCGGTTATGCATACCGAATTGTACAACGCTTATATACACTGGGAT
GACCTGAATTTGAAGAAATCTTATTTCCCAAGGGATGCATACAGTCAAAGCAAGCTGATG
AATGTATTGTTTTCAAGAGAACTGAGTAAACGATTGACCGGTACAGGTGTAACAACTTAC
TGCGTTCATCCGGGATTAGTGAGAACGAATCTCTTGCGGCATGTAGGAACAAACTCGTCT
TGCTGGGACTTCCTTTTCAGCTTTGTTACTAAAACCACGAGACGATTTTGGAAGACGCCA
GAACATGGAGCACAAACATCAATATATTGCGCAATTGCACCGGAGATAGAAAACGTTTCT
GGAAAATATTACAATACTGTACTGTTTCAACCATATAGTGATTGCCACGAAGAAACCGAA
GCTAGACTGGGTAGAGACGACGATGCAGCAAAGCGACTATGGGAAATCACCCAGGAGATT
ATTTCATCTGTGAATATAGATGAGAAGGATTAG
| SUPERFAMILY |
NAD(P)-bd_dom_sf (IPR036291) - T[108-365] 8.99E-58 |
| Pfam |
SDR_fam (IPR002347) - T[111-250] 7.0E-27 |
| PRINTS |
SDR_fam (IPR002347) - T[112-129] 7.3E-16 - T[188-199] 7.3E-16 - T[188-199] 1.3E-5 - T[233-249] 7.3E-16 - T[239-247] 1.3E-5 - T[274-293] 7.3E-16 - T[274-293] 1.3E-5 - T[295-312] 7.3E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RDH11_HUMAN | 47.195 % | 259 | 6.39E-84 |
| RDH13_HUMAN | 47.078 % | 254 | 4.77E-82 |
| RDH12_HUMAN | 49.013 % | 262 | 2.27E-85 |
