- Transcript 'Phfumi.CG.MTP2014.S3...' >
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- Transcript 'Harore.CG.MTP2014.S7...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S735.g05256.01.t
Possible name(s)
ZNF182; ZNF41; ZNF568
Gene model
Location
S735 [16,661 / 18,176]
Amino acid sequence
Length: 504
>Harore.CG.MTP2014.S735.g05256.01.p
MDKLNIIQNLYKQFLIGKYCDLQINVENTTFHAHSCVVAAASWVLEAILQNSIAGDSKFL
HPVKPSLSIQLHGVTPYSVSSILNYIYTNTLDPEIFTDFNKQKEVLHAAKVYKIDEMLSQ
LSGKEADKVNLLVENNFEVMPLPSERLDERLFEKLMPAEGEVVKSVMTDQHEGTSVAKII
ELTSTNLDVGIVKKSELSLKDEQEFVSQCFKYSKDHGILYCILCCEICSDPTELVSHMLE
HKEGRRVSVRAAVPNVNEDAVALSPSSSDDTIKTRSRKRRKLAPKKAFTCAECGVSYTTK
VYLIRHYNIRHPESCFCKVCGDVFQNTDDLQVHLRVHESELEEDETQNQLSLKLLNSRKG
KGKRVFTCNLCFANFGKKRELTAHLQSIHGIVKPMHVCTVCGKEFKEKASLRSHTRVHTG
EKPYMCSFCGKSFADQKTWKDHERRHRGEKPFLCTACGKSFTYRQSFTRHMKFHEGKRPF
QCSFCGKAFVLRQNLKEHEKRHNK
Nucleotide sequence
Length: 1,515
>Harore.CG.MTP2014.S735.g05256.01.t
ATGGATAAGTTGAACATTATCCAGAATCTTTACAAACAGTTTTTGATCGGGAAATATTGC
GACCTTCAAATCAATGTTGAAAACACGACATTTCATGCCCACAGCTGTGTCGTGGCAGCA
GCTTCGTGGGTGCTCGAAGCCATACTTCAAAACTCGATCGCGGGAGACTCGAAATTTTTG
CATCCAGTCAAGCCGAGCCTTTCCATACAGTTACATGGCGTAACACCGTACTCCGTGTCT
TCAATTTTAAACTACATATACACCAACACCCTAGATCCTGAAATTTTTACCGATTTCAAC
AAGCAGAAAGAAGTTTTACATGCAGCTAAAGTTTACAAAATTGATGAAATGCTCAGCCAA
CTGTCTGGGAAAGAAGCGGACAAAGTTAATCTCCTTGTTGAGAACAACTTCGAGGTTATG
CCATTGCCTTCAGAGAGATTGGATGAACGATTGTTTGAGAAACTGATGCCAGCCGAAGGT
GAAGTTGTAAAAAGTGTGATGACCGATCAACACGAAGGAACTTCCGTAGCAAAGATTATA
GAACTTACTTCGACAAATTTAGACGTTGGAATTGTAAAGAAAAGTGAACTTTCTCTCAAG
GACGAACAAGAATTTGTTTCACAATGTTTTAAATATTCAAAGGATCACGGAATATTGTAT
TGCATCCTATGCTGTGAGATTTGTTCGGATCCAACAGAGCTCGTGTCTCACATGCTTGAA
CATAAAGAAGGAAGAAGAGTATCAGTGAGAGCAGCAGTCCCGAACGTAAATGAAGACGCA
GTCGCTCTGTCGCCCTCTAGCTCTGACGACACGATTAAAACCAGGTCAAGAAAACGTAGA
AAACTTGCTCCGAAAAAAGCGTTCACTTGCGCAGAATGCGGAGTTTCATACACAACAAAA
GTTTACTTAATAAGACATTATAACATTCGTCATCCGGAAAGTTGTTTTTGCAAGGTCTGC
GGAGACGTTTTTCAAAACACAGACGACCTTCAGGTTCACCTCCGAGTTCACGAGTCGGAA
CTGGAAGAGGATGAAACCCAGAATCAGCTGAGTTTGAAATTATTAAATTCTCGGAAGGGA
AAAGGGAAACGAGTTTTCACATGTAACTTGTGTTTCGCAAACTTTGGGAAAAAGAGAGAA
CTCACTGCACATTTGCAGAGCATCCACGGAATCGTGAAACCGATGCACGTATGCACTGTA
TGTGGTAAAGAATTTAAAGAGAAAGCAAGTCTCAGATCTCACACAAGAGTGCACACAGGC
GAGAAACCGTACATGTGTTCGTTTTGCGGGAAATCTTTCGCGGACCAGAAGACATGGAAA
GATCATGAAAGACGACACAGAGGCGAAAAACCATTTCTTTGTACGGCGTGCGGGAAAAGC
TTCACATACAGACAGTCTTTCACACGGCATATGAAATTTCATGAAGGTAAACGTCCTTTC
CAGTGTTCGTTCTGTGGGAAGGCATTCGTCTTGAGACAAAATCTGAAAGAGCATGAAAAG
AGACATAATAAGTGA
| SUPERFAMILY |
SKP1/BTB/POZ_sf (IPR011333) - T[5-118] 8.63E-16 |
| Pfam |
BTB/POZ_dom (IPR000210) - T[12-120] 6.5E-16 |
| ProSiteProfiles |
BTB/POZ_dom (IPR000210) - T[20-95] 13.012 |
| SMART |
BTB/POZ_dom (IPR000210) - T[20-129] 1.5E-9 |
| SMART |
Znf_C2H2_type (IPR013087) - T[219-241] 2.7 - T[288-311] 0.043 - T[315-337] 0.029 - T[366-389] 0.28 - T[396-418] 8.3E-4 - T[424-446] 0.0023 - T[452-474] 0.0082 - T[480-502] 0.0011 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[285-333] 7.94E-7 - T[358-405] 7.69E-5 - T[405-461] 3.58E-19 - T[446-498] 8.0E-17 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[288-311] 9.577 - T[315-342] 10.72 - T[366-394] 10.492 - T[396-423] 16.54 - T[424-451] 14.773 - T[452-479] 15.355 - T[480-504] 12.778 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[315-337] . - T[368-389] . - T[398-418] . - T[426-446] . - T[454-474] . - T[482-502] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZNF41_HUMAN | 40.625 % | 162 | 6.07E-43 |
| ZN568_HUMAN | 37.6 % | 163 | 7.75E-44 |
| ZN557_HUMAN | 37.118 % | 156 | 1.69E-42 |