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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...'
  2. Transcript 'KH2012:KH.C1.1180.v1...'
  3. Molecular Tool 'TGFβ not assigned 1-MO (Imai's 25mer MO)'
  4. Region 'REG00000213'
  5. Transcript 'Harore.CG.MTP2014.S7...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S72.g02649.01.t

Possible name(s)

TNIP1; TNIP3

Location

S72 [251,855 / 268,488]

Sequences

Amino acid sequence

Length: 916

>Harore.CG.MTP2014.S72.g02649.01.p
MAVPKVKRTVYDQINSIAHASSKVVVVRLRYQCILNKEIQLRNMSSTSPKDSTELKTDSV
ASHPVVTSYSSIAASCPVLPSSYHGNKELHEQQTAFSLSEFRTSSMEGRRIDLLLQENER
LKKQLFHVENLGRLVADCKQSNLRLSDENQELRERLDQLVEMQYKNQVWQKKIVHQHRDH
PDFQHNLTMTSCVKQQIEKDNAITFEQNDFNTKLPAEETGSQQICSSVTSETFSTDEENQ
PGPDRTDLHTDDDEDLNDTCGQTTTTTTKGQTDELPSIEQTEQCKTSRQEEEELIAHEDP
DVHETRPMTIFSFPKKEKEQEDFRATQGATSKTQEVNSDSSLAEISQLEDMVGMANSSVN
SDNQPVASLEAESRSTGSVTIQFAKLATIFARLAQRVTQSQKKVRNSQAFCDALMRENDK
LKSVEGGELEKLKQSVRDKTAENKRLKQQVDACATTSGQGDSRGSQKATTKTPVANNTMK
EDSTVTDHTESTKQQDSVAKDANDEASGTDLIEKLKNRVKKLEGQRKEILNVNKQWHTQY
NKLREDYTAKLNAAKSEIEELKTQISGKQRENAKRRKDIDLLLKEAKKEIDILQHQKADL
GKSYALEHNKGMKLNEKIQGLKSDLSCIKAENQRLNQALEAAYSIRQSRQQSTNSIYDEQ
QVSEPNAVSEHVESNTDCVLGLQATLQGVDRIGVVLQQEQEQEQEQVAGTTSEEMEDFKT
QILVLQQQVKIYREDFETERRDREKNQAEKQRLSEEMTRMRDEMRALNQQVRAHEQDFRQ
ERREKQRLQRHLSRIQMHVASVGNTNAVGLYYGVDDVEDIQQTDRYVHHHHHIQPNPDIQ
RTERDFVLHTTASPTGTARRFAAMRTRSNPPPYSTRHQRRQTNTAGPRIRDGYLEPTPYH
HDPEVVYPPETGLNQL

Nucleotide sequence

Length: 3,707

>Harore.CG.MTP2014.S72.g02649.01.t
ATGGCGGTGCCTAAAGTTAAACGAACCGTGTACGACCAGATCAATAGCATCGCTCACGCC
TCATCAAAGGTAGTTGTCGTTAGACTTCGATATCAATGCATATTAAACAAGGAGATCCAA
CTGAGGAATATGTCAAGTACATCCCCCAAAGACAGCACTGAACTGAAAACAGACAGTGTG
GCATCGCATCCAGTAGTAACATCATACAGTTCGATTGCTGCCAGTTGTCCAGTGCTACCT
TCCAGTTATCATGGAAACAAGGAGCTTCATGAACAGCAAACAGCATTTTCTCTATCGGAA
TTTCGCACCAGTTCAATGGAAGGCCGTAGAATCGACTTGCTATTGCAAGAAAACGAACGT
TTAAAAAAGCAGTTGTTCCATGTAGAGAATCTGGGTCGATTGGTAGCTGACTGCAAACAG
AGTAACCTGCGATTGTCGGACGAAAATCAGGAATTGCGAGAGCGATTGGATCAGTTAGTT
GAAATGCAATACAAGAACCAGGTTTGGCAAAAGAAAATCGTTCACCAACATAGAGATCAT
CCAGATTTCCAACATAACTTGACAATGACTAGTTGTGTGAAGCAACAAATCGAGAAGGAT
AATGCCATTACTTTCGAACAAAATGATTTCAACACGAAGCTTCCCGCTGAGGAAACTGGA
TCCCAACAAATCTGTTCATCTGTTACCTCAGAAACCTTTTCGACAGACGAAGAAAACCAG
CCTGGTCCTGATAGAACCGACCTACATACCGATGATGACGAAGATTTGAATGACACATGT
GGGCAAACCACAACGACCACTACGAAGGGTCAAACCGACGAGCTTCCTTCCATCGAACAA
ACAGAACAATGTAAAACAAGTAGACAAGAAGAAGAAGAACTAATCGCTCATGAAGACCCC
GACGTGCATGAAACGAGGCCTATGACAATATTTTCTTTTCCCAAGAAGGAAAAGGAGCAA
GAGGACTTTAGAGCAACGCAAGGTGCAACTTCTAAGACCCAGGAAGTCAATTCTGATTCG
TCTTTGGCAGAGATATCTCAATTGGAAGACATGGTTGGGATGGCGAATTCGTCAGTTAAT
TCGGACAATCAACCCGTTGCCTCATTGGAAGCCGAATCCCGGAGTACTGGTAGCGTGACC
ATACAGTTTGCCAAACTAGCTACAATATTTGCGCGGTTGGCGCAGCGTGTTACTCAAAGT
CAAAAGAAAGTCAGGAATTCACAAGCATTTTGTGACGCTCTCATGAGAGAAAACGACAAA
TTAAAAAGTGTGGAAGGTGGAGAATTAGAAAAATTGAAGCAAAGCGTCAGAGACAAGACG
GCAGAAAACAAGAGATTAAAACAGCAAGTAGACGCTTGCGCCACTACGTCCGGACAAGGA
GATTCCAGGGGTTCACAAAAGGCTACCACTAAGACGCCAGTCGCAAACAACACAATGAAG
GAAGACTCTACGGTTACGGATCATACGGAATCAACAAAACAGCAAGACAGCGTTGCCAAA
GATGCTAATGACGAAGCGTCCGGTACAGATCTGATTGAAAAATTGAAAAATAGAGTGAAA
AAACTTGAAGGACAAAGAAAAGAAATTCTTAATGTCAACAAGCAGTGGCATACGCAGTAC
AACAAACTCAGGGAGGATTATACCGCCAAATTGAACGCAGCCAAATCAGAAATTGAAGAA
TTAAAGACCCAAATAAGTGGGAAACAACGTGAAAACGCGAAGAGACGAAAAGACATTGAT
CTTTTATTAAAAGAAGCGAAAAAAGAAATTGATATATTACAACATCAAAAGGCAGATTTG
GGTAAGAGCTACGCTCTGGAACATAACAAAGGTATGAAATTGAACGAAAAAATACAAGGT
TTGAAATCGGATTTGAGTTGTATCAAGGCCGAAAATCAAAGACTAAACCAGGCTTTGGAG
GCCGCCTACAGTATTCGTCAAAGTCGTCAACAATCGACAAACTCTATTTATGACGAGCAA
CAAGTTTCAGAGCCAAACGCAGTTTCGGAGCATGTTGAAAGCAATACAGATTGTGTACTC
GGACTACAAGCTACTCTTCAGGGGGTAGATAGAATTGGCGTTGTCCTCCAGCAAGAGCAA
GAGCAAGAGCAAGAGCAAGTTGCAGGGACGACGTCGGAAGAAATGGAAGACTTCAAGACT
CAGATACTAGTTTTACAACAGCAGGTGAAAATCTATCGCGAAGACTTCGAAACCGAGCGA
CGTGACCGCGAGAAAAATCAAGCGGAAAAACAGCGACTTTCGGAAGAAATGACGCGCATG
CGCGACGAAATGCGCGCACTTAATCAGCAGGTTCGCGCTCACGAACAAGATTTTCGACAG
GAAAGACGCGAGAAACAAAGATTACAGCGACATCTCAGTCGGATACAGATGCACGTAGCT
AGCGTGGGAAATACCAACGCCGTTGGCCTGTATTATGGCGTTGACGATGTTGAGGACATT
CAGCAAACCGATCGTTATGTTCATCATCACCATCACATTCAGCCGAATCCGGATATTCAG
AGAACCGAAAGGGACTTTGTGCTACACACTACCGCCTCACCTACAGGTACTGCACGACGA
TTTGCCGCCATGAGAACACGTTCAAATCCACCGCCTTACAGCACTCGCCATCAAAGGCGA
CAAACGAATACTGCGGGTCCGAGGATACGCGATGGCTACTTGGAACCAACCCCTTATCAC
CATGACCCGGAAGTAGTGTATCCGCCAGAAACTGGTCTCAACCAGTTATGATTGGAGTCG
GCCCTCTACTCATAAGTTATACTGACGACTTGTCTCTGACACGTCGCTGATAGACCATTG
TACAGAAGTCCTGTGACAAGTACTGGAACTTATTGGCCAAACAGACCAACATCTACGAAC
CCACTCTATAGTCGCCCCATTTCAAGGAATATAATGAACGCAAAACGGCCTTCATTCTCC
CTTCCGAACTACAAGCAATTTTCTTCTCTGCCTCGATATATGAAACTATTTGGGTGTCCT
GGGCAAACATATTTCTGCCATGTGACGTCATACATACGATTTGCCAAGCAAAACTAGAAC
GTTGAGGAATATTTGTTACTTTTGTTGTAATTCTCGCTTGTTAGTCGATAAGGTGACTTA
GATTCGATGTAAAAAGTAATTACAACGATCATGTAAATATAGAGCAGTGTACAGGGGAGT
AGCTTACTCTATCAAGTTACTTTGTTTTAGATATCTATTTGCAATATGTATCTTCGTTCT
TGGTATTTTTTATTACGGATACTGGAAGCCACACGATGTGCTTCTAATCAGTTTGAACTG
TAAAAATTTGTCTGCTATTGGAATATTTTTCACCTATATGACGGACAGTATCCACTTTAC
TCCTTGTGCTGTTTAAAATTTTACAGGACAATCCCAGTCGTGTCAAAATGACAGTACCAT
AACCACATTTCGTCTATTCGATTTCTGAATTAGGGTTTCCTTTTCCGTTGCTAAATACAT
CCACTTTAGTGTCATAAGGAGGAGTTTGCGTTCCTTTTTTGATTCAAAAGTTATAACTAC
TTTATATTTTTCATGTTTATTATGGTTGAGGAGTTAAACTTGAGAGCGTAGGCTAACTGT
TTTGTTTGATAATAAACCTCAATGCGTAACTTTCATTTGATATATATCATCTACGTTGAA
GTAAAGAAAATTCTAGAAGTTTTTTATAGTCCTGTAGCAGTTTTTCG

InterProScan

Pfam
CC2-LZ_dom (IPR032419) - T[699-767] 1.6E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TNIP1_HUMAN 26.682 % 105 1.96E-23