- Transcript 'Haaura.CG.MTP2014.S5...' >
- Transcript 'Harore.CG.MTP2014.S7...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S71.g04433.01.t
Possible name(s)
JMJD7; JMJD7-PLA2G4B; KDM8
Gene model
Location
S71 [80,733 / 84,871]
Amino acid sequence
Length: 579
>Harore.CG.MTP2014.S71.g04433.01.p
LYHRNNERKMYALGVVLTAILPLCWCGGKNEPVGHLQPLGSHKSPSVIIDEFTKENAPDP
KTFFEEYVKPSKAAIFRGVLKDSDAYNLWTDGYIRKNFGDLEVRLEAKHEKKHRTPIGEK
YLGRDNLRHFTDHYHDSKSKTYIVSELPSPMYHDFEVIPSLGACGEMSRRFVEIDIWWSG
GNSKSLLHKDAFNQMNCLLNGTKYWKLIEYKYEKYVHKHPEPSNEIGGFSDVNVDAVNLI
KHPNIAKTEWSNFTIHAGDCLFLPRSCYHQVTSTGTHNLAVSILFSRFDNRESLDFSDCN
ENTDYQRGKRLSELDVQWIWNGSGVMSMGRSDLEEQFRTELLHIAATVEKKGKRFTSKAF
INIFGSGGQKEDQKLRTGDAKKAFNLIDSDNDGAITEDEVKAMTTAELRQFATEIEPYEP
SNTYDFEYSFISYDIVLDTLKQALKQKNKLSRTEWVSLYMKVLGGTESFANQIFTRLSGS
EDENTIVSKDITKKDIAHALEKWIFYWVPQYSGLRKRPDQKEEEGGRKSADNNDDMDEED
QEDGDADEFEDQEDEIPGYEVDEEEEILFEEEDNFKDEL
Nucleotide sequence
Length: 1,873
>Harore.CG.MTP2014.S71.g04433.01.t
CTTTATCACCGTAATAACGAAAGGAAAATGTATGCACTTGGCGTAGTGCTGACAGCGATT
CTGCCTCTATGTTGGTGTGGAGGTAAAAACGAGCCGGTTGGTCATTTGCAACCTCTGGGA
TCTCATAAGTCACCTTCAGTCATCATAGACGAATTCACGAAGGAAAATGCACCCGATCCG
AAAACGTTTTTCGAAGAATACGTGAAGCCCAGCAAAGCTGCTATTTTTCGTGGAGTGTTG
AAGGACAGTGACGCTTATAATCTATGGACAGACGGATACATCAGGAAAAATTTCGGAGAT
CTTGAAGTTCGACTTGAAGCAAAGCATGAAAAGAAGCATCGAACTCCGATTGGGGAAAAG
TACTTGGGTCGTGACAATCTACGTCATTTCACCGACCACTATCACGATTCTAAATCAAAA
ACGTACATCGTTTCTGAACTTCCGTCTCCCATGTACCACGACTTCGAAGTAATTCCTTCC
CTAGGTGCGTGCGGGGAAATGAGTCGAAGATTCGTCGAAATCGACATATGGTGGAGCGGT
GGAAATTCAAAGAGTCTGTTGCATAAGGACGCATTCAACCAAATGAACTGTCTTTTGAAC
GGAACTAAGTACTGGAAACTGATCGAATACAAATATGAAAAGTACGTTCACAAACATCCG
GAGCCGTCTAACGAAATCGGCGGATTTTCAGATGTGAACGTCGACGCAGTCAACCTCATC
AAGCATCCAAATATTGCTAAGACAGAATGGTCGAATTTCACGATACATGCTGGAGATTGT
CTTTTTCTTCCTAGAAGTTGTTATCATCAAGTGACTTCGACTGGAACTCACAATTTGGCA
GTTTCAATACTTTTCTCGAGATTTGATAACCGAGAAAGTTTGGACTTTTCTGACTGCAAC
GAAAATACGGATTACCAAAGAGGGAAGCGCTTGAGTGAGCTTGACGTCCAGTGGATCTGG
AATGGAAGTGGAGTAATGTCAATGGGACGGAGCGACCTAGAGGAACAGTTTAGGACCGAA
CTGCTACATATTGCAGCAACAGTTGAAAAGAAAGGAAAACGGTTCACTTCTAAAGCATTC
ATCAACATATTTGGAAGCGGAGGTCAGAAAGAGGACCAAAAATTACGAACTGGCGACGCA
AAAAAGGCGTTTAACTTGATTGATAGCGACAACGATGGTGCTATTACCGAAGACGAAGTA
AAAGCAATGACCACGGCCGAATTGAGACAGTTTGCAACAGAGATCGAGCCATATGAACCT
TCAAATACGTACGATTTCGAATATTCCTTCATATCATACGATATAGTGTTAGACACATTG
AAACAAGCACTCAAACAGAAAAATAAGTTAAGTCGTACAGAGTGGGTAAGCCTCTACATG
AAGGTGCTGGGAGGAACAGAATCTTTTGCCAATCAGATTTTCACCAGACTCTCTGGATCA
GAAGATGAAAATACGATTGTGAGCAAGGACATTACTAAGAAGGACATCGCTCATGCCTTG
GAAAAATGGATATTCTACTGGGTACCACAGTATTCAGGCTTACGCAAGAGGCCTGATCAA
AAAGAAGAGGAGGGAGGGAGAAAAAGTGCAGATAATAACGATGATATGGATGAAGAGGAC
CAAGAAGATGGTGATGCAGATGAATTTGAAGACCAAGAGGATGAAATTCCAGGATACGAA
GTAGATGAAGAGGAAGAAATTCTATTCGAAGAGGAGGATAACTTCAAAGACGAGTTATAA
GCAAATAATTTGGTTATTTGGTCTATGGAACTTTAGTTTTGAATACAATGCAAAGGTTAT
GGGCATAAAACGCCGAAAATGTTACAAAATACTGTAAAGTGAATATCGTAACAAAACCGT
TTGAAATACAGAA
| ProSiteProfiles |
JmjC_dom (IPR003347) - T[147-302] 19.092 |
| ProSiteProfiles |
EF_hand_dom (IPR002048) - T[375-410] 11.389 |
| SUPERFAMILY |
EF-hand-dom_pair (IPR011992) - T[377-461] 2.12E-7 |
| SMART |
EF_hand_dom (IPR002048) - T[379-407] 0.0049 |
| ProSitePatterns |
EF_Hand_1_Ca_BS (IPR018247) - T[388-400] . |
| Protein Name | Identity | Bit Score | e-value |
|---|