Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Haaura.CG.MTP2014.S2...' > 
  2. Transcript 'Harore.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S6.g13951.01.t

Possible name(s)

COX5B

Gene model

Harore.CG.MTP2014.S6.g13951

Location

S6 [147,772 / 148,910]

Sequences

Amino acid sequence

Length: 141

>Harore.CG.MTP2014.S6.g13951.01.p
MALHKFSKLLLPSANLAQRSFHVSAVNKLLNKPLPTTEIVANGYQRIEMEAAKVGEDPLD
ANRNERFNAKGSGTKADPFIIPSRNHKRLVFFDPKDDRGPLPYFWVTAEEGGRCSVTGRH
YKLDVIEEDKWGIDELDLFLH

Nucleotide sequence

Length: 676

>Harore.CG.MTP2014.S6.g13951.01.t
CAAAATTTACGTTTAGTCGAAGTCAGTTTCAGTAATTCAAATATTGCTCCCAAATCCAGA
GGAGCCCAGTTAAAATATACATTTATGCATTGCAGTTCTGTTCAATTCCAAACATGGCAC
TTCACAAATTTTCTAAACTTCTTCTCCCATCTGCCAATCTGGCTCAAAGATCGTTCCATG
TCTCTGCAGTGAATAAACTATTGAACAAGCCACTCCCAACTACAGAGATTGTTGCGAACG
GTTATCAAAGAATTGAAATGGAAGCGGCTAAGGTGGGAGAGGATCCCTTGGATGCAAACC
GCAATGAAAGGTTCAATGCTAAAGGCAGCGGCACCAAGGCAGATCCGTTCATTATACCGT
CACGCAATCACAAACGTCTTGTGTTTTTTGACCCCAAGGATGATCGAGGGCCTTTACCTT
ATTTCTGGGTTACTGCAGAAGAGGGAGGACGCTGCTCAGTAACAGGCCGTCACTATAAGC
TGGATGTCATTGAGGAAGATAAATGGGGAATAGATGAATTAGATCTCTTCCTCCATTAAG
AATGTTTTATAAGTGCTTACATGCTTGATCTCTCGTGCTGTTTATTGTAAGCTCTTATGT
TCCATGTTTGCGTGTTTCGATTTAGCTTCTGGTAACTCAAAAAGTAAATTTAAAAGATCA
GATCTAATAAAAGCTT

InterProScan

PANTHER
Cyt_c_oxidase_su5b (IPR002124) - T[12-123] 7.0E-14
ProSiteProfiles
Cyt_c_oxidase_su5b (IPR002124) - T[29-130] 11.056
Gene3D
Cyt_c_oxidase_su5b_sf (IPR036972) - T[31-128] 4.6E-12
Pfam
Cyt_c_oxidase_su5b (IPR002124) - T[34-129] 1.5E-9
ProDom
Cyt_c_oxidase_su5b (IPR002124) - T[41-123] 1.0E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value