- Transcript 'Harore.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S6.g13224.01.t
Possible name(s)
ASPSCR1; NGLY1; UBXN6
Gene model
Location
S6 [311,137 / 314,673]
Amino acid sequence
Length: 426
>Harore.CG.MTP2014.S6.g13224.01.p
MKKLFNKVKSDYKFRNTGEGHKLTDDTRTVHSNEQPKAVPVRNQPTTAGQMKAAVAAIER
YNQNIAGPSSSKKVKMYPKEKPSPDMLPEEAKQISLKKEELIVDETPIQSLEGIRFISVL
TGEIILKSELQSHYRENLILKLGSDPVKASCDMIHTLNEDHQAIEIAIKTLCRYIDNLLS
EPNNEKFKRIRKGNKAFMERVAVIKGSEEFLNALGFKLTSIQIDDEKEELFFAINETVDL
EKIKEAKNCLTTTEPLKSNLCRNMKVYRPSDNAMRFNLPNEFYQLTMDDIKKEQKLRTET
VEQSRQLQTKAMRQRRTQGKRYNYTLLRIRFPEGIILQGTFATKETLVDVKKFVCEHINT
EWAPYTLKMATGQAIEEETKTLEKLNLVPAVVINLIWDTEVYEQLLQQGIKLSLSEEALS
KIMTLT
Nucleotide sequence
Length: 1,680
>Harore.CG.MTP2014.S6.g13224.01.t
CTGATTTTGATTGACATTTGTTTACAAACTTCCTAGTTTTCTATTTAAATCTCCTTTACT
TGCTAGTAAATGCATTATTTTTTGCTTATCTAGAAGGCAACATATCGTTCATCTGAATTC
TTATTCCATTCGTTTCCACCCACGATGAAAAAACTGTTCAATAAAGTGAAATCTGATTAC
AAGTTTCGTAATACCGGAGAAGGACACAAGCTTACAGATGACACAAGAACTGTGCATAGC
AATGAACAACCTAAAGCTGTCCCTGTGCGAAATCAACCAACGACAGCAGGTCAGATGAAA
GCAGCTGTTGCGGCAATCGAACGATATAATCAGAATATAGCTGGTCCCTCGAGTTCTAAG
AAGGTAAAGATGTATCCAAAAGAAAAACCAAGCCCCGATATGCTGCCTGAAGAAGCGAAA
CAAATTTCACTGAAGAAAGAGGAACTAATAGTTGATGAAACTCCAATCCAGTCGTTAGAA
GGAATAAGGTTTATATCAGTGCTGACTGGAGAAATAATTTTGAAATCTGAACTTCAGAGT
CATTACCGGGAAAACCTCATATTGAAATTAGGTTCAGATCCTGTCAAAGCATCCTGTGAT
ATGATTCATACCCTTAATGAAGATCATCAAGCTATTGAAATTGCTATAAAAACACTCTGC
AGATACATTGATAACCTACTCTCCGAGCCCAACAATGAAAAGTTCAAGCGAATACGGAAA
GGAAACAAGGCATTCATGGAGAGAGTAGCGGTGATCAAAGGCAGCGAGGAATTTTTAAAT
GCATTAGGATTCAAGCTCACTTCTATTCAGATCGATGATGAAAAAGAAGAATTATTCTTC
GCAATAAACGAAACCGTGGATTTGGAAAAAATTAAAGAGGCAAAGAATTGCTTGACAACA
ACGGAACCACTCAAATCCAATTTATGCCGAAATATGAAGGTTTATAGACCATCAGACAAT
GCGATGCGCTTCAATCTCCCTAATGAATTTTATCAGTTGACGATGGACGACATCAAAAAA
GAACAGAAATTAAGAACCGAGACTGTTGAACAAAGTCGACAGCTGCAAACAAAAGCAATG
AGACAGAGAAGGACACAAGGAAAACGATACAACTACACACTGCTAAGAATACGATTTCCT
GAAGGAATTATTTTACAAGGAACGTTTGCAACTAAGGAAACACTGGTTGACGTAAAGAAA
TTTGTCTGCGAACATATAAATACAGAATGGGCACCGTATACATTGAAAATGGCCACTGGT
CAAGCTATCGAAGAAGAAACTAAAACACTAGAGAAACTAAATCTTGTACCTGCAGTGGTC
ATAAACTTGATCTGGGATACCGAAGTCTATGAACAATTGCTACAGCAAGGAATCAAGTTA
TCGCTTAGTGAAGAAGCACTCAGCAAAATCATGACATTAACTTAAGTCACAAGATACATA
TAACCTACCATTTTCTAAAATGCAGTTATTTTTCTTTGACGTTAATCGTGATTCAGAGAA
AATAATATGCAGATGCATAAGAGATTCTAGACAGCTAGCTAGCTTACTTTGATAATATGT
TTAAATATTTTGTGGTGTAACGTAGAGCAGTGCTTCCCAAACTTTTTTGCTAGCGACCCC
TTTCGATTTATTAAAATTTTCCGCGACCCTTCATGTTTGACAGTGATAGTTCAAAATATA
| SUPERFAMILY |
PUB-like_dom_sf (IPR036339) - T[144-260] 5.89E-23 |
| Pfam |
PUB_domain (IPR018997) - T[162-244] 8.0E-21 |
| SMART |
PUB_domain (IPR018997) - T[166-235] 1.5E-10 |
| SUPERFAMILY |
Ubiquitin-like_domsf (IPR029071) - T[294-396] 2.12E-14 |
| ProSiteProfiles |
UBX_dom (IPR001012) - T[320-395] 11.302 |
| Pfam |
UBX_dom (IPR001012) - T[321-393] 1.4E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| UBXN6_HUMAN | 32.816 % | 235 | 4.26E-73 |
