- Transcript 'Harore.CG.MTP2014.S7...' >
- Transcript 'Harore.CG.MTP2014.S4...' >
- Transcript 'Harore.CG.MTP2014.S2...' >
- Transcript 'Harore.CG.MTP2014.S6...' >
- Transcript 'Harore.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S6.g10277.01.t
Possible name(s)
DLG1; DLG2; DLG3
Gene model
Location
S6 [741,875 / 756,357]
Amino acid sequence
Length: 643
>Harore.CG.MTP2014.S6.g10277.01.p
MYISWNLFTFSKVESQTARGGSQNESLISVMPVCKQDAERALSLLQRYHLKLTQPDDNQL
RCALEKVMDIFKSDLFHALLDIHEYYEMTIVESSKRQHSKQEFQSPRSFHENDAEFLHAS
GNIESSSIAEQTEEQSNNNENVENNKHNYAASDTPSPGYTEGIHEPSKRPGEHGATKYHS
AVTEEYKNEYQHPHQLHRQIQTYIDQPVVQQPVYEYDDIILERGTPGLGFSIAGGRDNPL
EGNDTSIYITKIIPGGAAAEDKRLRINDAILSVNNDDTRDVIHAEAVNALKQAGSTVRLR
VRRLPRPAIVYNELPEVAYQDSWLDIRLAKGTKGLGFSIAGGIGNQHIAGDNGIYVTKII
EGGAAEADGRLQVGDKIVTVDRIPLLEETHETAVAVLKSTREVVRLQVLRKSESSAPLPC
VPAGIEVSTEIRSPNQQHSDPIDYRREIMYQRDNPVKTSSTVRYDSQPQQLEPLYPAPAT
YSDHQAHSNKRPVIDLQRYEERNQQSAYIDPIDIPVVTNPQHSQFRSNGFNNNNVEETNS
SLLPLVSSDYDKRISRHIRTVTLSKGASSLGFNIVGGEENEGIFISYIHSGGIADMSRQL
FKGDQILLVNGIELANATHEEAAAALKGAGQTVTIVVQYKPEG
Nucleotide sequence
Length: 2,817
>Harore.CG.MTP2014.S6.g10277.01.t
ATGTACATATCTTGGAATTTGTTTACGTTTTCAAAAGTAGAATCCCAAACTGCGAGGGGA
GGCAGTCAAAATGAGTCTTTGATATCCGTCATGCCTGTCTGTAAGCAAGATGCCGAAAGA
GCATTGTCGCTCTTGCAACGGTATCACTTGAAGCTAACGCAGCCTGACGATAATCAGCTC
CGCTGCGCTCTGGAGAAAGTTATGGATATTTTCAAAAGCGATTTGTTCCATGCTCTTCTA
GACATACATGAATATTATGAAATGACAATTGTTGAATCTTCAAAACGTCAGCACAGCAAA
CAGGAATTCCAATCTCCCCGTTCTTTCCATGAAAACGATGCAGAATTTTTACATGCCTCT
GGAAACATAGAAAGCTCCTCAATAGCGGAGCAGACTGAGGAGCAGAGTAATAACAATGAG
AATGTTGAAAATAATAAACACAACTATGCTGCCAGTGACACACCATCCCCAGGGTATACA
GAAGGAATACATGAGCCATCAAAGCGACCTGGTGAACACGGTGCAACTAAATATCATTCT
GCTGTTACTGAAGAATACAAGAATGAATACCAACATCCTCATCAGCTTCATCGACAAATT
CAAACATATATCGATCAACCTGTTGTCCAGCAACCGGTTTATGAGTATGATGACATAATA
CTTGAAAGGGGTACCCCGGGACTTGGTTTTTCAATTGCTGGAGGAAGGGACAATCCATTG
GAAGGAAATGACACAAGTATATATATCACAAAAATTATACCTGGTGGTGCTGCTGCTGAA
GATAAAAGGCTTAGGATAAACGATGCCATCCTGTCAGTGAATAATGACGATACAAGAGAT
GTAATACATGCGGAAGCTGTAAATGCTCTTAAGCAAGCTGGATCAACAGTAAGGTTACGC
GTTAGAAGATTGCCAAGACCTGCAATAGTATACAACGAGCTTCCTGAAGTTGCCTACCAA
GATAGTTGGCTAGATATTCGACTGGCGAAAGGAACCAAAGGTCTTGGATTCAGTATAGCG
GGGGGAATCGGTAACCAGCACATTGCAGGCGACAACGGAATATATGTCACGAAAATCATA
GAAGGAGGTGCAGCGGAAGCTGACGGAAGACTTCAAGTTGGAGATAAAATAGTTACTGTT
GACAGGATTCCCCTCCTCGAAGAGACACATGAAACAGCGGTAGCCGTATTAAAATCGACA
CGAGAAGTTGTCCGTCTGCAAGTGTTAAGGAAGTCCGAGTCCAGCGCACCGTTGCCTTGC
GTTCCGGCAGGGATCGAAGTTTCTACTGAGATCCGGTCCCCTAATCAACAACATTCCGAT
CCCATAGATTATCGAAGAGAGATAATGTATCAACGTGACAATCCTGTAAAGACTTCATCG
ACAGTTAGATATGACTCACAACCTCAACAATTAGAGCCTCTATATCCAGCACCTGCCACC
TATAGTGACCATCAAGCTCACAGCAACAAACGACCAGTGATAGATCTTCAGAGATACGAA
GAAAGAAATCAACAAAGTGCTTACATCGATCCGATCGATATTCCAGTAGTTACGAATCCT
CAACATTCACAATTCAGAAGTAATGGTTTCAACAATAATAATGTAGAAGAAACCAATTCA
AGTCTTCTCCCTTTAGTCAGCTCTGACTATGATAAAAGGATTTCAAGACATATCAGAACA
GTCACGCTGAGCAAAGGAGCTTCCAGTCTCGGTTTCAACATAGTCGGAGGCGAAGAAAAC
GAAGGTATTTTTATCTCGTACATCCACTCTGGAGGGATCGCTGATATGAGCCGACAACTT
TTCAAGGGCGATCAAATTTTGTTGGTAAATGGAATAGAACTCGCTAATGCAACACACGAA
GAAGCTGCTGCTGCACTGAAGGGAGCTGGACAGACTGTTACTATCGTTGTTCAATACAAA
CCAGAAGGTTAGATGTGGACAGTTTCACGAGCGGTGATATTTTCACCACAATGTGGTCAA
GTAAGACATTCGTCGGGCAGACTTAAAGAACTGGCTCTCCGATTGAAATCCATCAAAAAC
ATTCAGAAAATCACCAAAACCATGAAGATGATCTCAGCGGCGAAATATGCACAGGCCGAA
AAGGCACTCAGACCGGCGCGTGTTTATGGTCTTGCAGCTTTGGCTCTTTTCAAGAAGACC
GAAATTCCAGTTGAAAATACAGCACCCAAACAACTGTTCATTACCTGCACTTCTGACCGT
GGTCTTTGCGGACCACTCCATGCCAACATTGTCAGAGAAATGAGGGAGGAATTTGATCAG
CTTGCAGAGGGCGTTGATGCTAAAGTTGTGACTATCGGTGACAAGGCAAAAATAATTATG
CAGAGTTCAATTCCACAAAGTATGCTGATGGAATGCAAAGAGCTTGGTCGAATCGCACCA
ACATTCTTGGACTCGACTGCAATTGCAGAAGGCATACTCGATTCTGGTTTTGAGTACTCT
CATGGCGCAATTTATTATAACTATTTCAAATCAGCCATGTCTCAAATTATAACTCGTCAG
CCAATATATTCGACGGAAACTGTGAATGCTGCGCCGAGTCTACTACTGTATGATTCCGTG
GATGAAGATGTCTTGAAAAGTTATCAAGAATTTCAGCTAGTCAACACCATCTACTATACA
CTGAAAGAAAACTATGCTAGTGAACAGGGAGCAAGAATGGTTTGCATGGATGGCGCTACA
AAGAACGCCGGTGAAATTATCGACAAGATGTCTTTGTTGTACAACCGTACAAGGCAGGCT
GTCATCACCACGGAGCTGATAGAAATCATTTCAGGAGTGACTGCATTGGAGGGCTAA
| ProSiteProfiles |
L27_dom (IPR004172) - T[34-94] 13.597 |
| Pfam |
L27_1 (IPR015143) - T[35-92] 3.7E-25 |
| SUPERFAMILY |
L27_dom_sf (IPR036892) - T[35-92] 4.71E-18 |
| SMART |
L27_dom (IPR004172) - T[37-97] 1.2E-7 |
| SUPERFAMILY |
PDZ_sf (IPR036034) - T[192-305] 3.94E-25 - T[319-413] 4.86E-25 - T[547-642] 1.3E-27 |
| ProSiteProfiles |
PDZ (IPR001478) - T[218-305] 22.636 - T[325-412] 22.657 - T[560-641] 20.948 |
| Pfam |
PDZ (IPR001478) - T[219-301] 4.7E-19 - T[326-409] 1.3E-18 - T[561-638] 1.1E-16 |
| SMART |
PDZ (IPR001478) - T[226-305] 3.6E-21 - T[333-412] 1.3E-21 - T[568-641] 1.4E-18 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DLG3_HUMAN | 43.953 % | 291 | 5.15E-88 |
| DLG4_HUMAN | 60.5 % | 230 | 2.85E-66 |
| DLG2_HUMAN | 45.767 % | 327 | 6.7E-101 |