- Transcript 'Harore.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S6.g00730.01.t
Possible name(s)
AL121581.1; MYT1; MYT1L
Gene model
Location
S6 [579,441 / 589,380]
Amino acid sequence
Length: 1,355
>Harore.CG.MTP2014.S6.g00730.01.p
VTRKRKHLCHPSRAFKPQREKENTELTRDGDDSGCRRGKLCVVSSSKTKSKMKVFIFFCS
GLDLTSSRDEERHLIQRGFLPRISATAISQRSDSSSPVRDEAKSFCRRSSSPEMPHFQGY
GELARRIQSLNQNRAEIPTSTSVEVPNVHTFRPIASPSDAFSEEDDGIQRSTKQAANFWG
SVTLVSDRKGKDARDMEDKSESDSIEFADDAPWPQSACSKSYSLSPTVSATDLKSPIPSH
NGSILSPLAMSPNAQAESVIKTEPMSPRSTNSIIASTGDSVREHEGVSPALEANFLPKPS
YLDRPLPPSFRDEFGERRAAMMYQHAHDTCFSSSGNNASNYSKESKCPTPGCDGTGHITG
LYTHHRSFSGCPHKDQMPKELQNMHDTSVKCPTPGCTGKGHVNGNRQTHRSLSGCPIAMN
SKTKAPQQRHLPVDNFSLSSSQGMDFKPHSVITTTPVFAPSSESSFVNPYVNIRDQRFSG
LLNQRRMKEERTEGEMRNLYSNSDSSLKCRISPVNQNELFPSPRISSNVNLKSNDEPFRL
AANMAAAASMMPSPYSYFGGNMGFVDPRIPSLPPGFLLDPESAKLMALRFMAMQSSQAFP
QIPPSLFLHPLFSSMQMRETSDKRTMQNIADQEVCSKKRKLDLDWNSEAENKIEKQKFKA
KFSPISGTPEPVLLPRSPKKTIPDLQRSPISPIYSDDSERTKSSSVDRDEKDSGFADDTG
KREEFGSSERQNKLSQEPDRNLEKRRKEAVSPWLKGSCDLENTALDLSVKNKPVVRRRSQ
DEISVGDYQDSRKRSFANSSPPSYPRPTMDDMIKAVASKSMYSQEHLRELLFRSAKLKDD
MRAIKDLYKGKAFPTSQNDIHVPGGFRTCAPRESPISNLKENYKGEKKTNADEKHNPHNL
TYSSYAKQYFHHRSQQQENSRLEHSPEMKPNMADMKPGSPFSSFRNLPTMLAMQHSSSES
IPPPFSVNGTASSVSKTLSAPVMTSSPIRTPPTQINQENIKAMLSLKEKPQPFTLIPLKQ
KIAGKKKELLACPMPGCDGKGHSTGNYTSHRSLSGCPLAPRSLVTAYSCEMKCPTEDCDG
TGHITGNYTSHRSLSGCPRAKRNRQSTNSTDLHTMSQPGFRNITESHGNQKIFERQDPDS
DQERSRISPTCLDFQKSHAFLSPFAKARITLHHGKENFEAEFIRQFPTSPREPENNQAPA
SRRRHSDVETITTPSSKANSEEMQTGLTSPLACKSNVLSPMCDQEMKTDHDISDDDEKYN
EVINSMLRIVRENESEKDSDHNQNGYHGNKPERQMFSAKRDLMMRLAGIALPYTREFPTQ
ENFTSYITQLRDFLQNQTCEESKALLAAVREAVSE
Nucleotide sequence
Length: 4,192
>Harore.CG.MTP2014.S6.g00730.01.t
ATGTCACTAGAAAGAGAAAACATCTCTGCCATCCCTCCCGCGCTTTCAAGCCGCAGAGAG
AGAAAGAAAATACCGAGCTCACTCGAGATGGTGACGACTCCGGCTGCCGTCGCGGAAAAC
TCTGCGTCGTTTCAAGCAGTAAAACAAAGTCAAAGATGAAGGTTTTCATATTTTTCTGTA
GCGGTCTCGATCTTACGTCCAGCAGAGATGAGGAACGTCATCTAATACAACGAGGATTTT
TGCCACGAATATCGGCGACTGCTATTTCTCAACGCAGCGATTCGTCGTCACCCGTTCGAG
ATGAAGCAAAATCTTTTTGTCGTAGATCCTCTTCTCCCGAAATGCCTCATTTCCAAGGTT
ACGGTGAACTCGCACGCCGTATTCAATCATTAAATCAAAACAGAGCGGAGATTCCTACCA
GTACGTCAGTGGAAGTTCCGAACGTCCATACATTCCGACCGATCGCTAGTCCTAGCGATG
CTTTTTCAGAAGAAGACGACGGCATCCAACGCTCAACAAAACAGGCAGCCAATTTCTGGG
GTTCTGTGACCCTGGTATCGGATCGGAAGGGGAAAGATGCAAGAGATATGGAGGACAAAT
CAGAATCTGATAGCATCGAATTTGCTGATGATGCCCCTTGGCCACAATCAGCCTGTTCCA
AATCTTATTCACTATCTCCGACTGTTTCTGCCACAGACCTTAAATCTCCTATTCCTTCCC
ATAACGGTTCGATTCTTTCGCCTCTCGCAATGTCGCCGAACGCACAAGCGGAATCGGTAA
TAAAGACCGAACCTATGTCTCCTCGGAGCACTAATTCTATTATAGCATCTACGGGAGACT
CTGTTCGAGAGCACGAAGGAGTTTCGCCTGCACTAGAAGCGAATTTTCTGCCCAAGCCGT
CTTATCTTGATCGACCTCTGCCGCCTTCCTTCCGAGATGAGTTTGGCGAAAGGCGTGCAG
CAATGATGTATCAGCATGCACATGACACGTGCTTTTCTTCTTCCGGAAATAATGCAAGCA
ATTACAGCAAAGAGAGTAAGTGCCCCACTCCGGGATGTGACGGTACAGGGCATATTACGG
GACTTTATACTCACCATCGTAGTTTCTCGGGATGTCCACATAAAGACCAAATGCCGAAAG
AATTGCAAAATATGCATGACACTTCGGTTAAATGTCCAACACCGGGTTGCACAGGGAAAG
GTCACGTCAATGGTAACAGACAAACTCATAGAAGCTTATCTGGCTGCCCGATCGCAATGA
ATTCAAAAACCAAAGCTCCGCAGCAGCGCCATCTGCCGGTTGATAATTTTTCCTTGTCGT
CTTCGCAAGGCATGGATTTCAAGCCTCATTCGGTTATAACGACGACTCCCGTCTTCGCGC
CATCTTCAGAATCATCTTTCGTAAATCCGTATGTAAACATTCGTGATCAACGGTTCTCTG
GATTGCTAAATCAACGTAGAATGAAAGAAGAGAGAACAGAGGGCGAAATGAGAAATCTGT
ATTCGAACAGCGATTCCTCTTTGAAATGTCGTATCTCGCCGGTCAATCAAAACGAGCTAT
TTCCATCACCAAGAATCTCGAGTAATGTTAATCTCAAATCCAACGATGAGCCATTCAGAC
TTGCCGCCAACATGGCAGCAGCCGCCAGCATGATGCCGAGTCCGTACAGTTACTTTGGCG
GAAATATGGGTTTCGTGGATCCGCGAATACCTTCATTACCTCCGGGATTTTTGTTGGATC
CCGAATCAGCTAAATTAATGGCGCTTCGATTTATGGCTATGCAGTCAAGCCAAGCGTTTC
CTCAGATCCCTCCATCTCTCTTCCTCCATCCCCTGTTCTCATCTATGCAAATGAGGGAAA
CCTCCGACAAGAGGACCATGCAAAACATTGCTGACCAAGAAGTTTGCTCAAAAAAGAGAA
AATTAGATTTGGATTGGAATTCCGAGGCAGAAAACAAGATTGAAAAACAAAAATTCAAGG
CTAAATTTTCTCCGATTTCCGGTACCCCGGAACCTGTCCTCCTTCCTCGATCCCCGAAGA
AAACAATCCCTGATCTGCAGCGTTCTCCCATTTCTCCAATCTATTCCGATGACAGCGAGC
GGACTAAAAGCAGCAGTGTTGATCGGGATGAGAAGGATTCGGGATTTGCAGATGATACTG
GAAAACGAGAAGAATTCGGATCGAGTGAGAGACAGAATAAACTATCGCAAGAACCAGATA
GAAATCTTGAAAAAAGGCGGAAAGAAGCAGTTTCTCCTTGGTTGAAAGGATCTTGCGATT
TAGAAAATACCGCCCTCGATCTCAGCGTCAAAAACAAGCCCGTGGTCAGGAGAAGGTCGC
AAGATGAAATCAGTGTAGGAGATTATCAAGATTCTCGGAAACGATCCTTCGCTAACTCCT
CTCCCCCTTCGTACCCAAGGCCAACGATGGATGACATGATAAAAGCAGTCGCCAGTAAAT
CAATGTACAGTCAAGAGCATCTGCGAGAATTATTATTTCGTTCAGCAAAGTTGAAGGATG
ATATGCGAGCCATTAAAGACTTGTATAAAGGAAAAGCATTCCCTACATCTCAAAATGATA
TTCATGTTCCGGGCGGTTTCAGGACGTGTGCGCCTAGAGAATCTCCAATATCAAATCTCA
AGGAAAATTACAAAGGAGAGAAAAAAACAAATGCTGATGAAAAGCATAATCCTCACAATC
TAACGTACAGTTCTTACGCAAAACAATACTTTCATCATCGAAGTCAACAACAAGAGAATT
CAAGACTAGAACATTCGCCTGAGATGAAACCTAACATGGCTGACATGAAACCGGGGTCTC
CCTTTTCATCTTTCCGAAATCTTCCGACGATGCTGGCCATGCAGCATAGCAGTTCCGAAA
GCATTCCTCCTCCGTTTTCTGTAAACGGTACCGCTTCGAGCGTGAGCAAAACGCTTTCAG
CCCCTGTGATGACGTCATCTCCCATTCGTACGCCACCGACCCAGATTAACCAGGAAAATA
TCAAAGCAATGTTGTCGCTTAAAGAGAAACCACAACCTTTTACTCTCATCCCTCTCAAGC
AGAAGATTGCAGGAAAAAAGAAAGAACTTCTTGCATGCCCTATGCCAGGATGCGATGGTA
AAGGTCATTCAACTGGAAATTACACGTCACACAGGAGTCTATCCGGTTGTCCACTGGCTC
CGAGATCGTTAGTTACAGCTTATTCATGTGAAATGAAATGTCCTACAGAGGATTGTGATG
GTACCGGACACATTACGGGCAATTATACTTCACACAGAAGTTTGTCGGGGTGCCCAAGGG
CAAAAAGAAATCGTCAGAGTACAAATAGCACCGACTTACACACAATGTCACAACCTGGGT
TCAGAAACATTACCGAATCTCATGGAAATCAAAAGATATTTGAACGGCAAGATCCAGATT
CTGATCAAGAAAGGTCACGAATAAGTCCGACTTGTCTTGATTTCCAGAAATCTCACGCGT
TTCTTTCTCCCTTTGCAAAAGCTCGAATTACGTTACACCACGGAAAAGAAAATTTCGAAG
CCGAATTTATCCGACAATTTCCAACATCCCCTCGTGAACCCGAAAATAACCAGGCACCAG
CTAGCAGAAGACGACACTCTGATGTTGAAACTATTACTACACCGTCTTCTAAGGCGAATT
CCGAAGAAATGCAGACAGGATTAACTTCTCCTTTAGCTTGTAAATCTAACGTCCTCAGTC
CAATGTGCGATCAAGAGATGAAAACAGACCATGATATTTCCGATGACGATGAAAAATATA
ACGAAGTTATCAATTCCATGTTGAGGATAGTGCGAGAAAACGAGTCAGAGAAAGACAGCG
ATCATAACCAGAACGGTTACCACGGCAACAAACCTGAACGTCAGATGTTTAGCGCAAAGA
GAGATCTGATGATGCGATTGGCAGGAATTGCTCTTCCTTACACAAGGGAATTTCCCACGC
AAGAAAACTTTACTTCTTACATTACACAGCTGCGCGATTTCTTGCAAAATCAGACATGCG
AAGAAAGTAAGGCTCTATTAGCTGCTGTGCGTGAAGCGGTCTCCGAATGATTATAGCTTC
CTATGGAATTACATTTGATGTATTCAATGTCGTTCAATTTCTTTGCCACGTTTCAGAAAC
CTGTTTGTATAGTATAACAAAATTACTAAAACACTGTAACGGGCTTTATTGA
| ProSiteProfiles |
Znf_C2HC (IPR002515) - T[338-381] 17.511 - T[382-425] 16.876 - T[1023-1066] 17.907 - T[1067-1107] 9.785 |
| SUPERFAMILY |
Znf_C2HC_sf (IPR036060) - T[344-386] 5.23E-14 - T[389-426] 4.32E-13 - T[1030-1066] 4.18E-13 - T[1070-1106] 1.57E-13 |
| Pfam |
Znf_C2HC (IPR002515) - T[346-372] 2.6E-11 - T[390-418] 4.1E-14 - T[1032-1059] 1.7E-13 - T[1072-1100] 3.1E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MYT1L_HUMAN | 68.478 % | 152 | 5.43E-37 |
| MYT1_HUMAN | 66.667 % | 145 | 5.68E-35 |
| ST18_HUMAN | 65.909 % | 140 | 1.38E-33 |
