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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...'
  2. Transcript 'Haaura.CG.MTP2014.S3...'
  3. Transcript 'Phfumi.CG.MTP2014.S2...'
  4. Transcript 'Phmamm.CG.MTP2014.S3...'
  5. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g52317.01.t

Possible name(s)

VRTN

Location

chrUn [320,441,483 / 320,444,141]

Sequences

Amino acid sequence

Length: 885

>Boschl.CG.Botznik2013.chrUn.g52317.01.p
MPNEAALVDDVSLTILKQFHYIITTDHTVLRVDGDGNCFYRAVSLALYGTAKHHLCLRLL
TALEIIENPKYYDEDAEGFVDLIDDIRVVSSPYALLVQKACIPGQWSEMMHIYALSAALG
SAIRSYYPPTSENEYLTEPFSRKCCGRGVSKSARPVATLMWTQTTVPTTSYPFRPNHFVP
MIKTSDLTSSDPGLACESKLKLEDQESDIDKPIIREPDNSKTSHRNEHGDVIANEQKYSL
PDITIPSEDSPMDQTNGEQMNTEMREVADGDKPESVKPNKTLTNITKLPFNEFLSTEEAV
NKIMDCKNALSKMPSGRKDNCYIMIDFTTNILRKAAKIRRIFYDDMGAWTKTMQTYSYYL
KVDNRLKYVYKPRCHNGAICTLRMKEYLPLSPQPCPGDVITVGRYYAKSKNNPGYEKRIS
WIESGPSEPCNVCVVEYKGISGDCGSHGNSSVNLQNYTRTPPSVIDKIKEKVKYGTGKRI
YVDLQNESESISQMPRNINQIHQTKHRDKVSKEGHNSLPRKCYADELLDVVNMMHTERFV
RRVIHSPGKASSIIMYTDDQITDIKKMCCTGKTVLGIDKTYNLGNVYVTVAVFKNLKMIS
TRTQENPIFIGPIYLHHSSDRGTFNFFNHLSSAIGGTFDRLVVGTDDEIALHSAIENSFK
NCKHVLCVNHLKTNLVDKLQHDIGTSKHLRKSLVNQVFNLLFSKDEMEFDRRQKDLVTRC
DGICPTLNPYLQNRLLPLLKNKVWRMRSFMGVEHQWFTNNNCESMNHVLKRLTDWKKKKL
PDLIHLLKSAITSQYLDVRKSITGRGTFTLAENCKKYLVSPWDWDDMPENEQDRSFQQLM
AFPAPAVYKLTRSLSQSTDGQLLAHNPSKRSGSKPGQTKCKRKVR

Nucleotide sequence

Length: 2,658

>Boschl.CG.Botznik2013.chrUn.g52317.01.t
TGCCAAACGAGGCTGCACTGGTGGATGATGTTTCATTGACGATTTTGAAGCAGTTTCATT
ATATTATCACCACGGATCACACGGTTTTGCGCGTTGATGGCGATGGGAATTGTTTTTATC
GCGCAGTGTCGCTGGCCCTATACGGTACTGCGAAACACCACTTGTGCTTGAGGCTCCTGA
CTGCGCTCGAAATTATTGAGAATCCAAAATATTATGACGAAGACGCAGAGGGATTCGTAG
ACCTTATAGATGACATTCGAGTTGTGTCATCACCTTATGCCCTTCTGGTACAAAAAGCAT
GCATTCCGGGGCAATGGTCCGAGATGATGCATATTTACGCGTTGAGTGCAGCCCTTGGCT
CCGCGATTCGCTCATATTATCCGCCAACATCGGAAAACGAATACTTGACAGAACCGTTCT
CACGCAAATGTTGCGGCCGCGGTGTATCGAAATCTGCAAGACCTGTCGCGACTCTCATGT
GGACACAAACGACTGTGCCTACGACAAGTTATCCATTTCGACCGAATCACTTCGTACCAA
TGATCAAAACCAGCGATCTAACTTCAAGTGATCCAGGTCTTGCATGCGAATCAAAACTGA
AATTGGAGGATCAGGAAAGCGACATTGACAAACCGATTATACGCGAACCAGACAACTCCA
AAACATCTCATAGGAACGAACATGGCGATGTAATTGCTAATGAACAGAAGTATTCGCTGC
CAGACATCACCATTCCGAGCGAAGATTCGCCTATGGACCAAACGAATGGTGAACAGATGA
ATACTGAAATGAGAGAAGTTGCTGACGGAGACAAACCCGAATCAGTTAAACCTAACAAGA
CTTTAACAAATATAACAAAACTGCCATTTAACGAGTTTTTGAGTACGGAGGAGGCAGTTA
ACAAAATTATGGATTGCAAAAATGCTCTTTCAAAGATGCCTTCAGGACGGAAAGACAATT
GTTACATTATGATAGATTTCACAACGAACATACTACGAAAGGCTGCCAAGATTCGTCGCA
TATTTTACGATGACATGGGAGCTTGGACGAAAACCATGCAGACATATTCGTATTACTTGA
AGGTCGACAACCGACTCAAGTACGTATACAAGCCGCGTTGCCACAACGGTGCAATTTGTA
CACTGCGGATGAAGGAGTATTTGCCGTTATCACCGCAGCCTTGTCCAGGTGATGTTATCA
CGGTTGGGCGATACTACGCTAAATCAAAGAACAACCCTGGTTACGAAAAACGTATAAGCT
GGATTGAGAGTGGACCGTCGGAACCATGTAATGTGTGTGTCGTGGAGTACAAGGGTATTT
CTGGGGACTGCGGTTCACATGGAAACAGCTCTGTCAATCTTCAGAATTACACCCGCACTC
CGCCGAGCGTTATTGATAAGATAAAAGAAAAGGTTAAATATGGAACTGGAAAGCGCATTT
ACGTTGATCTTCAAAATGAATCTGAAAGTATCTCGCAAATGCCTCGAAATATAAATCAAA
TTCACCAAACTAAGCACCGGGACAAGGTCAGCAAAGAAGGGCACAATAGCCTGCCGCGAA
AATGTTATGCAGACGAACTTTTGGATGTCGTTAACATGATGCACACGGAAAGATTTGTGA
GAAGAGTCATCCATTCTCCAGGGAAAGCATCTAGCATAATCATGTACACCGATGACCAAA
TAACAGATATTAAAAAAATGTGTTGTACTGGAAAAACCGTACTTGGAATTGATAAGACTT
ACAACCTGGGCAATGTGTACGTTACCGTAGCAGTTTTCAAAAACCTGAAGATGATAAGCA
CCAGAACGCAGGAAAATCCTATTTTTATCGGTCCAATATATCTCCACCATAGTTCAGATA
GAGGGACATTCAACTTCTTTAATCATCTCAGCTCCGCTATAGGAGGTACTTTTGATCGGC
TTGTCGTGGGGACAGACGACGAAATTGCACTACACTCGGCCATCGAAAACTCGTTCAAAA
ACTGCAAACATGTTCTCTGCGTCAATCATTTAAAAACGAATTTGGTCGACAAACTTCAGC
ACGACATCGGTACAAGCAAGCATTTAAGAAAAAGCCTGGTAAATCAAGTCTTCAATCTTT
TGTTCAGCAAAGACGAAATGGAATTTGATCGCAGACAAAAAGACCTAGTGACTAGGTGCG
ATGGCATCTGCCCAACGCTTAATCCATACCTACAAAATAGATTGCTACCTTTGTTGAAGA
ACAAGGTCTGGCGTATGCGTAGCTTTATGGGCGTCGAACACCAATGGTTCACCAACAACA
ACTGCGAGAGCATGAATCATGTTCTCAAACGATTGACAGACTGGAAAAAGAAAAAGTTAC
CAGACCTAATTCATTTACTAAAATCGGCGATCACTTCACAATACTTGGATGTGCGAAAGA
GTATCACGGGCCGTGGTACATTTACCCTTGCCGAGAATTGTAAAAAGTATTTGGTATCGC
CTTGGGATTGGGACGACATGCCAGAAAACGAGCAAGACCGTTCATTTCAGCAATTAATGG
CTTTTCCCGCCCCGGCAGTCTATAAGCTGACAAGATCCTTATCCCAATCCACTGATGGCC
AATTATTGGCACATAATCCTTCTAAACGAAGTGGTAGCAAACCAGGACAAACTAAATGTA
AACGAAAAGTTCGGTGAG

InterProScan

ProSiteProfiles
OTU_dom (IPR003323) - T[27-184] 14.766

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value