- Transcript 'Harore.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S68.g03744.01.t
Possible name(s)
CLVS1; RLBP1; TTPAL
Gene model
Location
S68 [258,726 / 261,279]
Amino acid sequence
Length: 336
>Harore.CG.MTP2014.S68.g03744.01.p
MNLEIKIVVISINLTTLNQYNHDSKYHRQSGNFRTLTDVEIEFSKLSWKDHGPIAGKGQL
PSHTKEKAHRELGETEEVKNYSIAKLRDVIKNGLEDKDENLRKGMQERFEQCNDDVLVRF
LRARKYNVDRTIELMTGNVRYRLNYPEIFTKIKQSALRECVIKGQPGVLQSRDNEGRVVM
FFRIENWDPVEYPFSQAIQYLVHILEKLLESEETQVNGICLVEDFRGYSMTQVASVGLTE
YKKMVDMLQGSFPSRFKGIYCIRQPWFFAKTYNIIKPLLRAKLFNRVFLYGEDLLEFYNA
FPKEFLPEELGGTGPPYDGEKVADLLFGPVSLDRDG
Nucleotide sequence
Length: 1,011
>Harore.CG.MTP2014.S68.g03744.01.t
ATGAATTTAGAAATAAAGATAGTTGTAATAAGCATCAATCTGACTACACTGAACCAGTAT
AATCATGACAGTAAGTATCATCGTCAAAGTGGAAATTTCCGAACTCTCACAGATGTAGAA
ATCGAATTTTCGAAATTATCATGGAAGGATCACGGACCAATAGCCGGAAAAGGACAATTG
CCTTCTCACACCAAAGAAAAGGCACACAGAGAGCTTGGTGAAACCGAAGAAGTCAAAAAT
TATTCAATTGCTAAACTCAGAGACGTAATTAAAAACGGACTGGAGGACAAAGATGAAAAT
CTGAGAAAGGGGATGCAAGAACGATTCGAACAATGCAACGATGACGTGCTAGTTCGATTT
TTACGCGCGAGGAAATATAACGTCGACAGAACGATTGAGCTCATGACAGGAAATGTCAGA
TATCGATTGAACTATCCTGAAATTTTCACTAAAATAAAGCAATCGGCTCTACGAGAATGC
GTAATAAAGGGTCAACCGGGGGTACTGCAAAGCAGAGACAATGAGGGTCGTGTGGTGATG
TTCTTCCGCATCGAAAACTGGGACCCGGTAGAATATCCTTTCAGTCAGGCTATTCAATAT
CTCGTTCACATTTTGGAAAAACTACTCGAAAGCGAAGAAACCCAAGTGAATGGAATTTGT
TTGGTTGAAGATTTTCGAGGCTATTCTATGACGCAAGTTGCATCTGTTGGATTGACAGAA
TACAAGAAAATGGTCGACATGCTGCAGGGATCGTTTCCAAGCCGATTCAAAGGAATTTAT
TGCATAAGACAGCCATGGTTCTTCGCAAAGACCTACAATATCATCAAACCGCTACTGCGA
GCGAAGTTGTTTAACCGCGTGTTTCTATATGGCGAAGATCTACTCGAATTCTACAACGCA
TTTCCGAAGGAATTTCTGCCCGAGGAGCTTGGCGGGACCGGACCACCGTACGACGGCGAG
AAAGTGGCAGATCTATTATTTGGCCCCGTAAGTTTGGATCGTGATGGATAA
| PANTHER |
RLBP1 (IPR032941) - T[51-330] 1.7E-114 |
| SUPERFAMILY |
CRAL/TRIO_N_dom_sf (IPR036273) - T[66-151] 1.83E-12 |
| Pfam |
CRAL/TRIO_N_dom (IPR011074) - T[111-136] 1.2E-5 |
| SMART |
CRAL/TRIO_N_dom (IPR011074) - T[113-138] 7.6E-6 |
| Gene3D |
CRAL-TRIO_dom_sf (IPR036865) - T[145-326] 1.4E-59 |
| ProSiteProfiles |
CRAL-TRIO_dom (IPR001251) - T[157-318] 19.734 |
| SMART |
CRAL-TRIO_dom (IPR001251) - T[157-315] 1.1E-32 |
| SUPERFAMILY |
CRAL-TRIO_dom_sf (IPR036865) - T[159-318] 6.54E-42 |
| Pfam |
CRAL-TRIO_dom (IPR001251) - T[163-313] 2.8E-32 |
| CDD |
CRAL-TRIO_dom (IPR001251) - T[167-313] 6.2542E-34 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TTPAL_HUMAN | 36.29 % | 171 | 1.82E-50 |
| RLBP1_HUMAN | 46.711 % | 289 | 5.5E-97 |
| CLVS1_HUMAN | 33.818 % | 164 | 6.94E-48 |
