- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Harore.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S669.g14853.01.t
Possible name(s)
GPS1; PSMD6
Gene model
Location
S669 [12,216 / 14,885]
Amino acid sequence
Length: 389
>Harore.CG.MTP2014.S669.g14853.01.p
MPLENLEEEGLKKLPDLDVAQLKFLLTLEEEKNNDQAKKNLLEAIKSNEMAPYYELICEE
LGWKVNASLMKKMKDANEKALKTLDEKISETEEMEYESEVREALLAKAEYLCKIGDKENS
MKVFGIAYDKTISLGHRLDIIFYLIRLGLFYMDHDMINKNLEKAKALIEEGGDWDRRNRL
KVYEGLYLIAIRDFEKAATLFLETVSTFTSYELMDYKRFVTYTVYICMLSLERTELREKV
VKGSEILEVLHSTQECKNYLFSLYDCHYAQFFQCLGKVEMELKRDRFFNPHYKFYAREMR
ILAYTQLLESYRSLTLDYMADAFGVSVEFIDKELSRFIAVGRLHCKIDKVGGIVETNRPD
SKNWQYQETIKKGDLLLNRVQKLSRVINI
Nucleotide sequence
Length: 2,319
>Harore.CG.MTP2014.S669.g14853.01.t
AACAAATGCTAAACAAAGTTCAGTTTTCGTTACGGCGTTTTTTCTGTTTTTTTCAAATGA
ATAAGATTAGAAGAATATCTAAATTCCCACCCTTTCTTTCGAATTATTTTCACACTATAG
TCTTGTGACTATACAGCGTTTAAAAGCGGTGGCGAAACTTTGAAAATGCTTACAAGTATT
TTAGACCCGCCTCCTCCATGTAATACTGCTCAACCAGTTATACACAGCACGTTGTTATAT
AATGGATCGAAATTCCAAGGCCATCAAAAAAGCAAAGGAAGTTGCTATGATGTTGAAGTC
ATTTTACAGCACGTTGACCTACAAACCTCTCATCTCTGTGGATACCTAAAAATAAAGGAA
CTAACGGAAGATTATCCAACAATGACAACATTTTTTGATGGAGAAATTATCAGTGAAAGA
TATCCGTTTTTGACAAGAAAATGGGAAGCTGATGAAGAAGTTGACAAAAAGCATTGGGGA
AAGTTTGATGCCTTTGAACAATTCCATAAAAATTTCAACACAGACGATTTTGATTACAAG
AATTTAAACAGTAGCGATTATGTGTTCATGAGATGGAAGGAACACTTCCTAGTTCCGGAT
CATAAAATTCAAGATATAAATGGAGCTTCATTCGCTGGCTTTTATTACATCTGTTTTCAG
AAATCAACTGCCACAATAGAAGGCTATTACTATCACAGAACTTCAGAGATGTATTGGAAT
AACAAATTTTTTTTTGCGCAGGTATCAGTCCCTAAACTTACGACATGTTCCAGAAATGTG
CACTGCAGTTTACATGTTCAGATAATGGAATATTCAGTAATGATGCTCTAGTTGATTACA
TTAAAATCGATCCTGGATTCTAATGAATTAGACCTACATGATAAATCTCTTGGTAATCAA
TTAATGCTGGATCAGCACATATGACATATTCATCTCTACCTGCGTATATTTAATGCTCAA
CATAACAACTATTAGTCATTAGTCATGTATTACAATTTACAAATACATGCATTTTTTATT
CCTTTGACAGAAGTATTTCAATGTTCTATTATACGAAGTAGCCCTGGTACTGGTTGAATC
ACAATTTAAATGTTGATGACTCTCGATAACTTTTGTACTCGATTCAAGAGCAGATCTCCC
TTTTTAATTGTCTCTTGGTATTGCCAATTCTTGCTGTCAGGTCGGTTGGTTTCAACAATG
CCCCCTACTTTATCTATTTTGCAATGAAGTCTTCCAACAGCAATGAAACGTGACAGCTCC
TTGTCAATGAATTCCACGCTGACCCCAAATGCGTCGGCCATATAGTCGAGAGTTAGGCTT
CGGTAGGATTCGAGTAGTTGAGTGTAAGCTAGGATCCTCATTTCCCGAGCATAGAATTTG
TAATGCGGGTTGAAGAAACGATCTCTTTTTAATTCCATCTCTACCTTTCCTAAGCACTGA
AAGAACTGAGCATAATGACAATCGTAAAGTGAGAAGAGATAGTTCTTACATTCCTGAGTG
CTATGTAGAACTTCCAAAATTTCTGATCCTTTCACAACCTTTTCTCTGAGCTCGGTTCTC
TCGAGGGATAGCATGCAGATGTAGACTGTGTATGTGACAAAGCGTTTGTAATCCATCAGC
TCGTAAGAAGTGAAAGTTGAAACCGTTTCTAAGAAAAGAGTGGCTGCTTTTTCGAAATCG
CGAATGGCGATCAAATAAAGACCCTCGTACACCTTGAGCCTGTTCCTTCTGTCCCAGTCA
CCACCTTCTTCGATCAGTGCCTTTGCTTTCTCCAAATTTTTATTGATCATATCATGATCC
ATGTAGAACAGTCCCAATCGGATCAAATAAAATATGATATCTAGTCGGTGACCGAGCGAA
ATCGTCTTGTCATATGCAATCCCAAATACCTTCATGCTGTTCTCTTTGTCTCCTATTTTA
CAAAGATATTCAGCTTTCGCCAACAGCGCTTCTCGAACTTCCGACTCGTACTCCATTTCC
TCGGTCTCTGATATTTTTTCATCCAAAGTCTTCAACGCTTTTTCGTTTGCATCCTTCATT
TTCTTCATTAGTGAAGCGTTTACTTTCCATCCGAGTTCTTCACAAATCAACTCGTAGTAC
GGCGCCATCTCGTTTGACTTAATTGCTTCCAACAGATTTTTTTTCGCTTGATCATTGTTC
TTTTCCTCTTCGAGAGTGAGCAGAAATTTCAACTGCGCAACATCCAAGTCAGGAAGTTTT
TTAAGACCTTCTTCTTCCAGATTTTCTAAAGGCATTTTTGCAGTTCCTGTGGGTCTTAGC
GACACTTCGATAATGTACTACAAGTGTATACTAAAGCTT
| PANTHER |
PSMD6 (IPR035268) - T[7-389] 3.5E-181 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[64-237] 1.55E-8 |
| Pfam |
Rpn7/CSN1 (IPR019585) - T[68-239] 8.2E-54 |
| Pfam |
PCI_dom (IPR000717) - T[257-357] 1.3E-15 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[285-366] 1.09E-18 |
| SMART |
PCI_dom (IPR000717) - T[290-373] 1.5E-23 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CSN1_HUMAN | 22.388 % | 82 | 6.65E-17 |
| PSMD6_HUMAN | 69.152 % | 575 | 0 |