Aniseed - Transcript Card

Transcript Model

Transcript Id

Harore.CG.MTP2014.S660.g10715.01.t

Possible name(s)

EPHA3; EPHA4; EPHA7

Gene model

Harore.CG.MTP2014.S660.g10715

Location

S660 [29,227 / 30,564]

Sequences

Amino acid sequence

Length: 136

>Harore.CG.MTP2014.S660.g10715.01.p
MSNDDENQVPLRTFQVCSVDKIGGNSWFRTPFIPLNRTESVHVEIKFTIRSCDDLPHVRT
CKETFNLYYLEANSDRSGREKRMNDDVYTKVDTLAADERYPTGTHVTNIETRMVGPLSQK
GLYIAFQARDHMFIMM

Nucleotide sequence

Length: 411

>Harore.CG.MTP2014.S660.g10715.01.t
ATGAGTAATGATGACGAGAACCAAGTACCGTTGAGAACATTTCAAGTCTGTTCTGTCGAT
AAAATCGGTGGAAATAGCTGGTTCCGGACTCCGTTTATCCCGCTAAATAGAACTGAAAGT
GTCCACGTCGAAATCAAATTCACAATCCGATCTTGTGACGATCTTCCGCATGTCAGAACA
TGCAAAGAAACTTTCAACCTTTACTATCTTGAAGCAAATTCAGATCGTTCAGGTCGAGAA
AAACGGATGAACGATGATGTGTACACTAAGGTCGACACGTTAGCAGCAGACGAGCGATAT
CCAACCGGAACGCACGTCACGAATATTGAAACCCGTATGGTTGGTCCGTTGAGCCAAAAA
GGACTTTACATTGCTTTCCAGGCACGTGATCACATGTTTATTATGATGTAA

InterProScan

SMART	Ephrin_rcpt_lig-bd_dom (IPR001090) - T[1-136] 1.6E-23
ProSiteProfiles	Ephrin_rcpt_lig-bd_dom (IPR001090) - T[1-136] 34.539
Gene3D	Galactose-bd-like_sf (IPR008979) - T[1-131] 8.0E-38
SUPERFAMILY	Galactose-bd-like_sf (IPR008979) - T[3-128] 1.7E-35
Pfam	Ephrin_rcpt_lig-bd_dom (IPR001090) - T[3-129] 4.2E-38

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
EPHA4_HUMAN	46.512 %	115	5.88E-31
EPHA3_HUMAN	43.609 %	114	1.72E-30
EPHA7_HUMAN	48.12 %	119	2.75E-32