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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...' > 
  2. Transcript 'Harore.CG.MTP2014.S1...' > 
  3. Transcript 'Harore.CG.MTP2014.S3...' > 
  4. Transcript 'Harore.CG.MTP2014.S3...' > 
  5. Transcript 'Harore.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S659.g00008.01.t

Possible name(s)

Harore.CG.MTP2014.S659.g00008

Gene model

Harore.CG.MTP2014.S659.g00008

Location

S659 [35,187 / 39,187]

Sequences

Amino acid sequence

Length: 580

>Harore.CG.MTP2014.S659.g00008.01.p
QDSLERCRTLMRKFHQVPGPKQQSSFQSNDFGSSHQSTSRTTFKSTDFPKPASKEFPSTS
FERTTPASSTKYEPRDKPDFSTSFERTTPASSTKYEPRDKPKFSADRPSSPWKSNANIGG
NVELDLAKSISLQEKSELYMKHFEYQSAYNVLKELQELQGDSWKQFETLQQIVECLIMTD
QSCDEEMNEIISTCKYLRLSPRDIHSTAEKCFDEEKFVRSYIMFHCAGKLHKTGGEVDVI
TGITKCASRMDDILKKLIKKPRYRRVATSNIIPAMKELLRDFREMEYDRTEENIVHEAEC
LHFVGSGYHEINDYETALQYFGEGIQLLRELGEGAYKYRLFSALLNNTGSSYFYLGHASQ
ALPYHEEARSVVEYAEDFPNEEQKEKGTKGIEHNLQTCLKHGKRSDWPATTPGRSSPFYD
PGRSSNYGGDRMYREPKLGAPGKTAPGKTPTSFSSYKKPQSTSNTETNSLKEKSQRYMEQ
GEHLSACDTLQKLIEKQEDPREKLETLQKIAECHVMCDQPCGDDVNEIVTTCQSLRLSPK
DMETTAGRHEKESQFVRAYVIMDIKEDLTILFQAKNRIKD

Nucleotide sequence

Length: 1,744

>Harore.CG.MTP2014.S659.g00008.01.t
ACAGGATAGCCTCGAAAGATGTCGGACACTGATGAGAAAGTTTCATCAGGTACCGGGACC
GAAACAACAAAGCAGTTTCCAATCTAATGATTTCGGTTCCTCTCACCAAAGCACGTCGAG
AACAACATTTAAATCCACCGACTTCCCGAAGCCAGCAAGCAAGGAATTTCCTTCAACTTC
ATTTGAGAGAACGACTCCAGCATCATCAACCAAGTATGAACCAAGAGATAAACCGGATTT
CTCAACTTCATTTGAGAGAACGACTCCAGCATCATCAACCAAATATGAACCAAGAGATAA
ACCAAAGTTCTCAGCTGACAGACCAAGTTCACCTTGGAAATCTAACGCAAACATCGGCGG
CAACGTAGAGCTCGATTTGGCGAAAAGTATCTCCCTTCAAGAAAAATCAGAGCTTTATAT
GAAACACTTCGAGTACCAGTCAGCCTACAACGTTTTAAAAGAATTGCAGGAATTACAAGG
AGATTCATGGAAACAGTTTGAAACCTTACAACAAATTGTCGAATGTCTTATTATGACTGA
CCAATCATGCGATGAAGAAATGAATGAGATAATTTCAACCTGCAAGTATCTTCGTCTTTC
CCCGCGCGATATTCATTCAACAGCTGAAAAATGTTTCGATGAGGAAAAATTCGTTCGCTC
TTACATCATGTTTCACTGTGCCGGTAAGTTGCACAAGACCGGCGGTGAGGTGGACGTGAT
CACTGGCATAACAAAATGTGCTTCAAGGATGGACGATATTCTTAAAAAATTAATAAAAAA
GCCAAGGTACCGAAGAGTAGCCACGAGTAACATCATTCCAGCTATGAAAGAGCTGCTGCG
GGACTTCCGTGAAATGGAATACGATCGAACCGAGGAAAATATTGTCCACGAAGCAGAGTG
CCTTCATTTTGTCGGATCAGGATACCATGAAATCAATGATTATGAAACAGCACTACAGTA
CTTCGGCGAAGGAATTCAGCTACTTCGGGAATTGGGAGAAGGAGCGTACAAATACAGATT
ATTCAGCGCCTTGTTGAACAACACCGGATCGTCCTATTTCTATCTCGGGCATGCTTCGCA
AGCTTTGCCTTATCACGAAGAGGCACGATCTGTTGTAGAGTATGCTGAAGATTTCCCGAA
CGAAGAACAAAAAGAAAAAGGCACAAAAGGAATCGAACACAATTTGCAAACCTGCTTAAA
ACACGGCAAAAGATCCGATTGGCCAGCTACTACTCCTGGACGATCTTCTCCATTCTATGA
CCCCGGAAGATCCAGCAATTACGGTGGAGATAGAATGTACAGAGAACCTAAACTTGGAGC
TCCCGGGAAGACAGCACCAGGCAAAACACCGACCTCTTTCAGTTCGTACAAAAAACCACA
GAGTACAAGCAACACTGAAACAAACTCTCTGAAAGAAAAGTCACAGCGGTACATGGAACA
AGGGGAACACTTGTCTGCTTGCGACACATTGCAGAAACTCATTGAAAAGCAGGAAGATCC
TCGCGAGAAGTTGGAAACGTTGCAAAAGATTGCCGAGTGTCACGTCATGTGTGATCAACC
ATGCGGGGATGATGTAAACGAAATCGTTACAACCTGTCAATCACTTCGACTTTCACCAAA
GGACATGGAAACAACAGCAGGAAGGCACGAGAAAGAATCTCAATTTGTGCGTGCTTACGT
CATAATGGATATAAAGGAAGATTTGACGATTTTATTTCAGGCGAAAAATCGAATTAAGGA
TTGA

InterProScan

SUPERFAMILY
TPR-like_helical_dom_sf (IPR011990) - T[123-163] 1.55E-9 - T[287-371] 1.55E-9
ProSiteProfiles
TPR_repeat (IPR019734) - T[129-162] 5.045 - T[298-331] 8.29 - T[342-375] 5.841 - T[467-500] 5.222
Gene3D
TPR-like_helical_dom_sf (IPR011990) - T[273-404] 5.8E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value