- Transcript 'Harore.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S64.g08255.01.t
Possible name(s)
SDHB
Gene model
Location
S64 [116,810 / 118,428]
Amino acid sequence
Length: 286
>Harore.CG.MTP2014.S64.g08255.01.p
MAISLRISRTVLRKSFPSLHPTAMVAIRTSATTAEAKIDEAARLKKFSIYRWNPEVKGQL
PVMQNYEVDLNECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNINGGNTLACLA
KIDENLKKTTKIYPLPHMFVVKDLVPDMNNFYAQYRSIEPYLKQKDESKKGVENYQSVED
RQKLDGLYECILCACCSTSCPSYWWLSNKYLGPAVLMQAYRWIIDSRDEYTHERLEKLDD
PFSVYKCHTIMNCTQTCPKGLNPGLAIAEIKKMISQLKPGEAVVRS
Nucleotide sequence
Length: 861
>Harore.CG.MTP2014.S64.g08255.01.t
ATGGCCATCAGTTTGAGGATTTCTCGCACAGTGTTGCGAAAATCTTTCCCTTCGCTTCAC
CCAACAGCAATGGTTGCAATTCGGACGTCTGCAACTACAGCAGAAGCAAAGATAGACGAA
GCAGCTCGTCTAAAGAAGTTCTCCATCTATAGATGGAACCCAGAAGTTAAAGGTCAACTC
CCCGTTATGCAAAACTATGAGGTCGATCTCAACGAATGTGGACCCATGGTGTTGGATGCT
TTGATCAAGATTAAAAACGAAATTGATCCTACGCTCACCTTTCGGAGATCGTGCAGGGAA
GGAATCTGTGGTTCATGTGCCATGAATATCAACGGAGGAAATACACTCGCGTGCTTGGCG
AAAATTGATGAAAACCTGAAAAAAACTACAAAGATATACCCCCTCCCTCACATGTTCGTG
GTGAAGGACCTGGTGCCGGATATGAACAACTTCTACGCTCAGTATCGTTCGATCGAGCCT
TACCTGAAACAGAAAGATGAGAGCAAAAAAGGAGTTGAAAATTATCAGTCAGTCGAAGAT
CGTCAAAAGCTAGACGGGTTGTATGAGTGTATCTTGTGCGCTTGTTGCTCTACTTCTTGT
CCTAGTTACTGGTGGCTCTCTAACAAATATCTTGGGCCTGCCGTTTTGATGCAAGCATAT
CGATGGATCATTGACAGCCGAGACGAATATACCCACGAGAGGCTCGAGAAGCTAGATGAC
CCATTTTCCGTCTACAAATGCCACACCATCATGAACTGCACGCAGACCTGTCCTAAAGGA
CTCAACCCTGGCCTAGCCATAGCAGAAATTAAAAAGATGATATCTCAGCTAAAGCCAGGA
GAAGCCGTCGTCAGATCATAA
| Gene3D |
Beta-grasp_dom_sf (IPR012675) - T[33-147] 1.1E-48 |
| SUPERFAMILY |
2Fe-2S_ferredoxin-like_sf (IPR036010) - T[44-147] 1.18E-29 |
| Pfam |
Succ_DH/fum_Rdtase_N (IPR025192) - T[46-152] 3.9E-33 |
| TIGRFAM |
Succ_DH/fum_Rdtase_Fe-S (IPR004489) - T[49-271] 7.5E-86 |
| ProSiteProfiles |
2Fe-2S_ferredoxin-type (IPR001041) - T[54-138] 10.114 |
| CDD |
2Fe-2S_ferredoxin-type (IPR001041) - T[64-127] 1.73837E-4 |
| ProSitePatterns |
2Fe2S_fd_BS (IPR006058) - T[98-106] . |
| SUPERFAMILY |
Helical_ferredxn (IPR009051) - T[148-275] 2.09E-36 |
| Gene3D |
Helical_ferredxn (IPR009051) - T[148-284] 2.9E-61 |
| ProSiteProfiles |
4Fe4S_Fe-S-bd (IPR017896) - T[180-210] 7.122 |
| ProSitePatterns |
4Fe4S_Fe_S_CS (IPR017900) - T[190-201] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SDHB_HUMAN | 71.014 % | 417 | 1.11E-148 |
