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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C5.184.v3....' > 
  2. Transcript 'Harore.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S625.g01360.01.t

Possible name(s)

TSPAN13; TSPAN31; TSPAN5

Gene model

Harore.CG.MTP2014.S625.g01360

Location

S625 [4,072 / 7,097]

Sequences

Amino acid sequence

Length: 272

>Harore.CG.MTP2014.S625.g01360.01.p
MSCIAVYTPSNTDYISNKIIEIMCGGFNCSKNALAALNVLYLLVSFLLIGVASYANAASI
ITSIEVAGGIIACGLFLFFISILGLIAATKHHQVMLFFYIVVLFLLFILQFSISIACLAL
SEQQENDLLHGAWVSQSENSVANKSVIDAQTYFKCCGWNETDLNNATIVNQCEKELKICS
NSSASSELPKCEPCEDILVSTVGSVLVATGGIGLFFSFTEVLISSGFSYQFNVFIITDAW
CVLSSSIQESERSACKSKSIFVIMMLWTSILV

Nucleotide sequence

Length: 819

>Harore.CG.MTP2014.S625.g01360.01.t
ATGTCATGTATTGCTGTTTATACCCCTTCTAACACTGACTATATTAGTAATAAAATAATA
GAAATAATGTGTGGAGGTTTCAATTGTTCAAAAAATGCTTTGGCTGCATTAAATGTCTTA
TATTTGCTCGTTTCATTTCTTCTCATCGGAGTCGCGTCCTATGCAAATGCAGCATCTATT
ATCACAAGCATTGAAGTAGCTGGCGGGATAATAGCTTGTGGACTATTTCTCTTCTTTATT
TCAATCCTGGGATTAATAGCTGCAACAAAGCATCACCAAGTCATGCTTTTCTTCTACATT
GTTGTTCTGTTTCTTCTCTTCATCTTGCAGTTTTCAATTTCGATTGCTTGTCTAGCGCTC
TCCGAACAGCAAGAGAACGACTTGCTTCATGGAGCTTGGGTTTCACAATCTGAAAACTCA
GTTGCAAATAAATCTGTGATAGACGCACAAACATATTTCAAATGTTGTGGATGGAATGAA
ACTGATCTTAACAATGCAACAATAGTTAATCAGTGCGAAAAAGAGTTGAAAATATGCAGC
AATAGTTCTGCTAGTTCTGAATTGCCTAAATGTGAACCATGCGAGGATATATTAGTGTCA
ACAGTTGGAAGTGTTTTGGTAGCAACCGGAGGAATTGGATTGTTTTTCAGTTTCACAGAG
GTTCTAATCTCATCAGGTTTTTCTTATCAATTTAATGTTTTTATTATCACAGATGCTTGG
TGTGTACTTAGCAGTTCGATTCAGGAATCAGAAAGATCCGCTTGCAAATCCAAGTCAATT
TTTGTGATAATGATGTTGTGGACTTCAATTTTGGTGTAG

InterProScan

PIRSF
Tetraspanin (IPR000301) - T[21-226] 1.4E-23
Pfam
Tetraspanin/Peripherin (IPR018499) - T[31-220] 3.2E-20
PRINTS
Tetraspanin (IPR000301) - T[32-55] 3.9E-7 - T[63-89] 3.9E-7 - T[90-118] 3.9E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TSN13_HUMAN 45.771 % 142 6.76E-42
TSN31_HUMAN 42.786 % 162 9.12E-50