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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...'
  2. Clone 'cima869841'
  3. Transcript 'KH2012:KH.C2.643.v1....'
  4. EST 'AHC0AAA233YB17_RM1'
  5. Transcript 'Harore.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S5.g13567.01.t

Possible name(s)

LEF1; TCF7; TCF7L2

Location

S5 [147,699 / 202,019]

Sequences

Amino acid sequence

Length: 822

>Harore.CG.MTP2014.S5.g13567.01.p
MPQLNSDEAATDEPTTYTTEECEEEQRWHNDADLNDIKGDLVEESDCDERPTNINKTHSH
GEATSKDVLDRDSRDEIKGPGRTYLYPHDIGSIVSSLHPSNLFNGVPPNGKVPYPYSMPY
HPLLYGASPSPDIDSKTGLPRSHHPDIPSMYSLPGQLGQIPHPLAPWHAPPLYPICTAST
MASILRYPHHPFAAFTTSAAVAASSMPRFPMGAHPHNPGMHPTMIPHPALVSNGPLSNMG
NVHPAHNKMDQDKPSGRHSKSEHSGHGHSKRDRPYVKKPLNAFMLYMKEQRAKVVAECTL
KESAAINQILGRKWHSLSREEQQKYYELARKERQLHLQMYPGWSARDNYGKRKKRKKEKS
QGECTAQNPKKCRAVFGLEQQQLWCAPCRRKKKCIRYQHDDDSDEDDIASPGSPSYQGPY
SHQGMQFDSIRSTSPLSLTSQSGVANGSSYVPPQTSSTSRLHSNHVSPQQQLPQHSHMPV
NGIKQELRTSPLAIDGQPSMTNGGKGFEPYSGRKGHRAPSSENSFKSEGSPHSQGAGSNS
SHGNHNHRSNLSANRNNGNNNNNNCNSADDILDRHVELSIPSSDAMNRRSSLDTNGLQRS
MSRNGESVRKSNSFEESDMPGTSGIVSGSRHHPPSSLRHHNTSVNSNTSADSPNSSAVRT
HHRNSSKLSNGPSTPHMQHHPSPLHTPSGSLFLPPNSGPSPLLSPTYNHPSPNGSHFLPY
TYFNPSMLAAAFGPPPSPMGLIGLSSFKSMSNSSLGVPIGGHSSGSSGSNQARVTSGAAS
SIVPKLYFGALGTPEEIEKGPADSIKTLLVVPCNFFITRRIF

Nucleotide sequence

Length: 4,234

>Harore.CG.MTP2014.S5.g13567.01.t
AGGTCGTACGTATATCGTAAATTATTTGGTAGAAAGTGAGAAATTCAACGGGAACTACGT
CGGGAAACCGGGAAAATAAAAGTATAAAATGCCGCAGCTTAATTCCGACGAAGCGGCAAC
TGACGAACCGACGACGTATACCACCGAGGAATGCGAGGAAGAACAGCGGTGGCACAACGA
TGCCGATTTGAATGATATCAAGGGAGATTTGGTCGAGGAAAGCGACTGCGATGAAAGACC
CACAAATATTAACAAGACACACAGCCATGGAGAAGCTACTAGTAAAGACGTACTTGATAG
AGATTCTCGTGACGAAATAAAAGGTCCTGGAAGAACATACCTATATCCACACGACATTGG
ATCTATCGTATCAAGTCTTCATCCTTCAAATTTGTTTAATGGAGTGCCACCAAACGGCAA
GGTTCCATATCCATATTCAATGCCATATCACCCACTACTATATGGAGCATCACCTTCCCC
TGATATCGATTCAAAGACTGGTCTACCAAGGTCTCATCACCCTGACATCCCATCTATGTA
CTCCCTTCCTGGTCAGCTGGGACAGATTCCTCACCCTCTTGCACCATGGCATGCTCCACC
CCTCTATCCAATCTGCACTGCGTCTACAATGGCTTCAATCCTTCGATATCCTCATCACCC
ATTCGCCGCCTTCACGACCTCAGCTGCCGTTGCAGCATCGAGTATGCCAAGGTTCCCGAT
GGGAGCACATCCACATAATCCCGGCATGCACCCAACCATGATACCGCACCCAGCTTTGGT
ATCGAACGGACCACTGAGTAACATGGGTAACGTACATCCAGCACATAACAAAATGGATCA
AGACAAACCAAGTGGGCGTCATTCAAAATCAGAGCATTCAGGCCACGGTCATTCGAAACG
CGACAGGCCTTACGTGAAGAAGCCACTGAATGCATTTATGCTTTACATGAAGGAACAAAG
AGCAAAAGTTGTTGCTGAATGCACACTGAAGGAAAGTGCTGCCATCAATCAGATACTTGG
AAGAAAGTGGCACAGTCTGTCGCGTGAAGAGCAACAAAAATACTATGAGCTTGCTAGGAA
AGAGAGGCAACTACATTTGCAAATGTATCCTGGATGGAGCGCTAGAGATAATTATGGTAA
AAGAAAAAAGAGAAAAAAGGAGAAGAGCCAAGGAGAATGTACAGCTCAAAATCCTAAAAA
GTGCAGAGCAGTGTTCGGCCTTGAACAACAGCAGTTATGGTGTGCTCCGTGCAGGAGAAA
GAAGAAGTGCATTCGTTATCAGCACGATGATGATTCAGATGAAGATGATATTGCAAGTCC
TGGATCTCCCAGTTATCAGGGTCCCTACTCTCACCAAGGAATGCAGTTTGACTCGATACG
TTCCACTTCACCGCTCTCTCTGACATCACAATCAGGCGTAGCCAATGGCAGCAGCTATGT
CCCTCCTCAGACAAGCTCCACCTCTAGGTTGCATAGCAACCATGTGTCACCTCAGCAACA
ACTTCCGCAGCATTCCCACATGCCGGTCAATGGGATAAAACAGGAGCTGAGAACGTCACC
TTTAGCGATAGATGGTCAGCCATCCATGACTAACGGAGGAAAAGGATTTGAACCTTATTC
AGGCCGAAAAGGTCATCGGGCCCCAAGCAGTGAAAATTCATTCAAATCAGAGGGTTCGCC
CCACAGCCAAGGAGCCGGGAGCAACAGCAGTCATGGCAACCACAATCATCGTAGCAACCT
CTCTGCCAACAGGAACAACGGGAATAATAATAACAACAACTGTAACAGTGCAGACGATAT
TTTGGATCGGCATGTTGAGCTATCTATACCATCTAGCGACGCAATGAACAGGCGTTCCTC
CCTCGACACTAATGGACTTCAGAGGTCAATGTCGAGAAATGGCGAATCCGTACGTAAATC
AAACTCTTTCGAAGAAAGCGATATGCCGGGGACGTCTGGCATTGTATCTGGGTCACGGCA
TCATCCTCCGAGTTCTCTACGACATCATAATACCAGCGTGAATTCGAACACGTCTGCTGA
CTCACCCAATTCGAGCGCGGTAAGAACTCACCACCGTAACAGCTCAAAACTCTCAAATGG
ACCCAGTACCCCACATATGCAGCATCACCCTTCGCCCCTACATACCCCCTCAGGTAGCCT
GTTTTTGCCTCCCAATTCAGGGCCGTCCCCTCTCCTGTCACCCACATACAATCACCCAAG
CCCCAACGGTAGTCACTTTTTGCCTTACACCTATTTTAATCCCAGTATGCTAGCTGCTGC
TTTCGGACCCCCTCCCTCACCAATGGGTCTCATCGGTTTATCCTCATTCAAAAGCATGTC
GAATTCAAGCCTTGGAGTCCCTATTGGGGGCCATAGCTCGGGGTCCAGTGGGAGCAATCA
GGCCAGGGTAACGTCAGGGGCAGCTAGTTCAATTGTTCCAAAACTCTACTTTGGGGCCCT
TGGTACCCCCGAGGAAATAGAAAAAGGGCCCGCAGACTCTATCAAAACACTATTGGTGGT
GCCATGCAACTTTTTTATCACGAGGAGAATATTTTAGGGTCAATAACTACCTTTTAAATG
CTATCGCATCTCTCTTTTTTTACTTGAGCGTATTTAAATTTTTCCTCTAAAATATTTTTC
CAAGTCTTGATGCTGGATCGTGGCAGAGAATCTGTTGCAAAATACTTAGAATCTACCTAG
AATTTTGACCCGGTTTTGTCGTTTTATAAATAAAGTTCAATCCTGACGCACAATCCATAC
GGAAATGTCATTTTTCACTAACATTAGAATGTTTTTATGCAAGTTTTATCAGTACCTTAT
AATTCTATCCGGATTTTCATCTTAGCGATATTGTTCGCGATGCGGTTGATCCTCCATTGG
CTTTGTGTGGATCTAATACGGATGGGGATGGAATTGGAGTTGGGAGTTATTGGGTTGTTA
TAGATATCCCAAACAATCTGATTCTAATTTAACCTTTCAAGAAAGGATAAGTTTTGAGCC
TTTGTTACAGTTTCCCATTTGCAATGCCATTTATAAGATGTAGAGAATTTAATTTGATAA
CTGCTGTCTGAAAAACTATGAATTGTGAAAGAAAATGCAGAATTGTTGAAATTATTTTGA
AACGTTTTACCTCAAATCAACACCAACTCTAGTTCTTGTGGTACATTTCTATGACGTTTA
AGCTAGTAAACAATTTCCTTTAGTTAGTATGGCAAGTTCAGTCAAAAATATAATGAATAT
GTGATCATAAAAACATTATTCCCGACTTTTTTTAAATAAATATCTTCTCCGTTTCTCTCA
TGAAACAGATGCTCGCCAGTGCGACATCATAATTTAAAAACGCATTGTAAAACAATTTAT
ATTTGTGGTTGTACTAGTAGTGCAACAGGTCCCCAGAGCTGGATTAAGATTTTTTAGGCC
ACTGGGCTACAAATATTGGGGCCCAGGGTAAATTATTCATATTTTAGTCGCTGGAGTGGT
CACAAACGTAAGTCATACAATATATATGTATACAGTAGAGTGTTTCTGTGCAGCAACCCA
TGCTTTAATTCAGCACTGTAGGCCCCCGTATACAAATATTTCTATTTTTGCTCAGTTGCC
AAACTATGTCATAGCAATTACCCCGAAAGTGCTAATTTCTGGGAAATTGTGAATTTTGTT
ATTTTTCTACAACTCTTTACCAAAAAAACCTTTTGAAAATGTGCAGAATGTTGTCAAATC
TTTGCTGAAAGTTCTTTGCGCTATCGTATGTGTGCCACATTTGGATATTTCATTTCATGA
CTCCTTGACTTTTCTGCTGGTTGTGACATCACAATGAATAACTTATACTATTACTTTTAG
CAATTACGTTGAAAATACATTTCTGTAAAGATTTTTTTCATCGGTTTAAGATATTTTTTT
GTCTTTTTTTGCCACATTTCTATCGTTTTTTTTGTCGATTTTAAACAAACAGCAACTTTT
CAGTTCATATGTCAAAATTGTGATGTCACTGTTCCCATTTGCATGTATATTATGACATCA
CCAGCATATCCTGTGATGTTGTCCATGAACTTGTGACGTCACAATGCATCGTGTAAGGCT
ATAATGAAGAATTTTACGATATTTTCATATTCCATTTTTAAATATTCGTTTTATTATTAA
GTCATACATGAATCAGTTTTTCATATCATGATGAAATTAAATTCTTTGATTGAATTCAAC
AAGGCTCGATAGAATAGCTGCTCATCAGTACAAG

InterProScan

SUPERFAMILY
HMG_box_dom_sf (IPR036910) - T[267-344] 1.57E-20
Gene3D
HMG_box_dom_sf (IPR036910) - T[275-359] 3.6E-24
SMART
HMG_box_dom (IPR009071) - T[275-345] 1.3E-20
ProSiteProfiles
HMG_box_dom (IPR009071) - T[276-344] 15.941
Pfam
HMG_box_dom (IPR009071) - T[276-343] 1.2E-21

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TF7L2_HUMAN 50.498 % 242 4.69E-70
LEF1_HUMAN 51.417 % 201 3.37E-57
TF7L1_HUMAN 39.078 % 196 8.56E-54