Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'KH2012:KH.C11.328.v1...' > 
  2. Molecular Tool 'cicl11b03-MO (Hamada's MO)' > 
  3. Transcript 'KH2012:KH.S1248.1.v1...' > 
  4. Transcript 'Harore.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S5.g12876.01.t

Possible name(s)

Harore.CG.MTP2014.S5.g12876

Gene model

Harore.CG.MTP2014.S5.g12876

Location

S5 [221,736 / 223,106]

Sequences

Amino acid sequence

Length: 295

>Harore.CG.MTP2014.S5.g12876.01.p
MNFKLCSKSTQISSHLPGETFRLWSTARYSRALDLFQQLLPLQKNPWNVLNTLLMQTECN
MMCNNRRKVCEGREKVIKQVTSLNPAINYVTEMAKECVSGKLYIRAIFLFYCAAKLHEMK
NEGDFSVLGVEFCVENVTKIVRKMTNVDPEYKVIILDHITPILLDMLEGLREIRNASHKL
RAEQEAWCLFSIGLCYGYCSLNDKSAEYNELAIVVLKNELGEDATMFQIYGFCHNNAGEA
YGRLNVRETALERFQFALKIFANVTDWFSEKERKNEMEVTKNNIKVMKETLTAQT

Nucleotide sequence

Length: 926

>Harore.CG.MTP2014.S5.g12876.01.t
AAAAGAAAATTGTCGAATATAAAACATGAACTTTAAATTATGTTCAAAGTCCACTCAAAT
ATCTTCTCATCTCCCAGGTGAAACTTTTCGTTTATGGAGTACAGCACGATATTCACGAGC
ATTGGACCTTTTTCAGCAACTGCTGCCACTCCAGAAAAACCCATGGAATGTTCTTAACAC
GCTTCTCATGCAAACCGAGTGTAACATGATGTGTAATAATAGGCGTAAAGTATGCGAAGG
AAGAGAAAAAGTAATAAAACAGGTGACTTCACTAAACCCGGCGATAAATTACGTCACTGA
AATGGCGAAGGAATGCGTGTCCGGTAAACTCTACATCAGGGCGATATTTTTGTTCTACTG
CGCGGCGAAACTGCACGAGATGAAAAACGAAGGAGATTTTTCCGTGTTAGGGGTGGAATT
TTGCGTGGAAAATGTGACAAAAATCGTCAGAAAGATGACCAACGTGGATCCAGAATACAA
AGTCATAATTTTGGATCATATTACGCCTATACTATTGGACATGTTAGAAGGTCTTCGGGA
GATTCGTAACGCTAGTCACAAACTTCGCGCTGAGCAAGAAGCCTGGTGTTTGTTTAGCAT
TGGTCTCTGCTACGGTTACTGCAGCTTAAATGACAAAAGCGCAGAGTACAATGAACTCGC
CATAGTAGTACTGAAGAACGAATTGGGAGAGGACGCGACAATGTTTCAAATCTACGGATT
TTGTCATAACAACGCAGGCGAGGCGTACGGACGATTAAACGTCCGCGAGACAGCGCTAGA
GAGATTTCAATTCGCACTAAAAATCTTCGCCAATGTTACTGATTGGTTCAGCGAAAAAGA
ACGAAAGAATGAAATGGAAGTGACTAAAAATAATATCAAGGTAATGAAAGAAACACTTAC
AGCACAAACTTAATACCGGAGTTTCC

InterProScan

SUPERFAMILY
TPR-like_helical_dom_sf (IPR011990) - T[23-47] 1.17E-6 - T[174-266] 1.17E-6
Gene3D
TPR-like_helical_dom_sf (IPR011990) - T[164-284] 6.9E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value