- Transcript 'KH2012:KH.C1.333.v1....' >
- Transcript 'KH2012:KH.C1.133.v2....' >
- Transcript 'Boleac.CG.SB_v3.S164...' >
- Transcript 'Cisavi.CG.ENS81.R1.4...' >
- Transcript 'Harore.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S599.g05598.01.t
Possible name(s)
WDR45; WDR45B; WIPI1
Gene model
Location
S599 [26,588 / 27,617]
Amino acid sequence
Length: 342
>Harore.CG.MTP2014.S599.g05598.01.p
MAVNHLMFNQDKSCFSCAMDNGIRIYNVEPLVEKCRLETEVVGSVSKVIMLHRTNLLAII
GGGQKQRFASNTVLVWDDRKKVLVSEYRFSHDVLNVRLRRDKLVAVLQKRVYVFNFPNDS
KKILEVDTKRNPLGLCELCTSSEKQVMAVPGHKVGSLQLIDLSAADSGDSASPVNINAHQ
GELACIAINHQGTLVATASAKGTLIRLFDIQTRQKLVELRRGTDQAMVYCINFSNDSSFL
CASSDKGTVHIFALKDKALNRRSAFAKAGKVGLINPYISSQWSLANFTVPAECACVCAFS
GSNSVVALCMDGTFHKYLFTADGTCNREAYDIYLEVGDEVDF
Nucleotide sequence
Length: 1,029
>Harore.CG.MTP2014.S599.g05598.01.t
ATGGCTGTGAACCACCTCATGTTTAACCAAGATAAATCTTGCTTCAGTTGTGCAATGGAC
AACGGAATTCGTATTTACAATGTTGAACCACTGGTGGAAAAATGTCGCTTGGAAACCGAA
GTTGTCGGAAGTGTTTCGAAAGTTATCATGCTTCATCGCACAAATTTACTCGCAATTATT
GGTGGAGGCCAAAAGCAACGATTTGCATCGAATACTGTCTTGGTATGGGACGATAGAAAG
AAGGTTCTGGTCAGCGAATACAGGTTTTCTCATGATGTATTAAATGTACGTTTGCGAAGA
GACAAACTTGTTGCTGTTCTACAGAAACGAGTCTATGTATTCAATTTCCCAAACGATTCG
AAAAAGATTTTGGAAGTTGATACAAAACGTAATCCTCTTGGACTTTGCGAGCTATGCACA
AGTTCAGAAAAACAGGTGATGGCTGTACCCGGTCACAAAGTCGGTAGTTTACAATTAATT
GATCTCTCTGCTGCTGATAGTGGAGATTCTGCATCTCCTGTCAACATAAATGCGCATCAA
GGAGAACTCGCATGCATTGCGATTAATCATCAAGGAACTCTTGTTGCTACGGCATCGGCG
AAAGGAACGCTTATCAGATTGTTCGACATTCAAACGAGACAAAAGCTTGTTGAATTACGA
CGGGGGACAGATCAAGCGATGGTTTATTGCATAAATTTTAGTAACGATTCATCATTCTTG
TGCGCCTCTAGTGACAAAGGAACCGTTCATATATTCGCATTAAAGGACAAAGCGTTGAAC
CGTAGATCAGCCTTCGCAAAAGCGGGAAAAGTCGGTCTAATTAATCCGTACATTAGTTCC
CAGTGGAGTTTAGCTAATTTCACAGTACCTGCAGAATGTGCGTGCGTCTGTGCTTTCTCC
GGTTCAAATTCGGTTGTTGCACTTTGCATGGACGGAACTTTTCATAAATATTTGTTCACA
GCGGACGGAACATGCAATCGTGAAGCTTATGATATTTATCTTGAAGTTGGTGATGAAGTT
GATTTCTAA
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[3-316] 4.43E-32 |
| PANTHER |
WIPI4 (IPR032910) - T[3-342] 4.5E-150 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[5-324] 3.5E-22 |
| SMART |
WD40_repeat (IPR001680) - T[170-209] 0.15 - T[212-253] 0.49 |
| Pfam |
WD40_repeat (IPR001680) - T[222-252] 0.0023 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| WIPI3_HUMAN | 46.246 % | 318 | 6.0E-108 |
| WIPI4_HUMAN | 60.623 % | 459 | 5.46E-163 |
| WIPI1_HUMAN | 32.567 % | 116 | 3.54E-29 |