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- Transcript 'Harore.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S58.g11718.01.t
Possible name(s)
POLR2I; POLR3K; ZNRD1
Gene model
Location
S58 [303,856 / 304,583]
Amino acid sequence
Length: 173
>Harore.CG.MTP2014.S58.g11718.01.p
MGCRIILSLRNFSINIASERFKGHLKIEYCTVSQAPLKLRLSTRNKMQEQVIRKGPGFVG
IKFCQECNNMLYPKEDKQNKILLYSCRNCDFQMEADNACIYVNKIVHEVDELTQIIADVA
QDPTLPRTKDHSCPKCHHKEAVFFQSQSTRAEEGMRLYFVCTNPQCGHRWTQL
Nucleotide sequence
Length: 522
>Harore.CG.MTP2014.S58.g11718.01.t
ATGGGATGTCGTATAATTTTATCCCTTCGCAATTTTAGTATTAACATCGCGTCGGAAAGG
TTCAAAGGGCATTTAAAAATCGAGTACTGTACTGTAAGCCAAGCACCACTGAAATTAAGA
TTAAGTACAAGAAATAAAATGCAAGAACAAGTTATACGGAAAGGTCCTGGGTTCGTCGGG
ATCAAGTTTTGTCAAGAATGCAACAATATGCTTTACCCAAAAGAAGATAAGCAAAACAAA
ATTCTTTTGTATTCGTGTCGTAATTGCGATTTTCAAATGGAAGCAGACAACGCTTGTATT
TACGTTAACAAGATCGTTCACGAAGTTGATGAACTGACACAAATCATAGCAGATGTCGCA
CAGGACCCTACACTCCCTCGGACAAAGGATCACTCCTGTCCAAAATGCCATCACAAGGAA
GCCGTGTTCTTCCAGTCACAGTCTACAAGAGCTGAAGAAGGAATGAGACTTTATTTTGTG
TGTACTAACCCTCAGTGTGGACATCGGTGGACTCAGTTATAG
| Pfam |
DNA-dir_RNA_pol_M/15kDasu (IPR001529) - T[61-96] 7.7E-13 |
| SMART |
DNA-dir_RNA_pol_M/15kDasu (IPR001529) - T[62-115] 2.4E-20 |
| ProSitePatterns |
DNA-dir_RNA_pol-M_15_CS (IPR019761) - T[63-89] . |
| CDD |
Zn_ribbon_RPB9_C (IPR034012) - T[121-171] 7.23417E-30 |
| ProSiteProfiles |
Znf_TFIIS (IPR001222) - T[129-171] 14.182 |
| Pfam |
Znf_TFIIS (IPR001222) - T[131-171] 3.2E-14 |
| SMART |
Znf_TFIIS (IPR001222) - T[131-172] 2.9E-15 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RPB9_HUMAN | 82.051 % | 217 | 6.77E-74 |