- Transcript 'Harore.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S58.g08646.01.t
Possible name(s)
ZFP2; ZNF235; ZNF345
Gene model
Location
S58 [180,028 / 181,502]
Amino acid sequence
Length: 466
>Harore.CG.MTP2014.S58.g08646.01.p
MRYYCKRCRRKFTKPHSYERHVEKHKITKVLCYKIKSSVRKCIHTERTDFKKTREKTKAR
DYQINLENYHINNEYPIGSLNFIDNKPFICAVCNKTFSYARNIRRHMKIHTDEKEFGCMI
CNKEFLHKVDLKRHMKTHTGEKPFKCEICYKMFATNGNLSSHLKVHMKSELSYCPICNKA
FTREDSIKKHMILHTGEKPYECKSCGKRFAHGSALTRHNRIHTKEKPYCCQYCHKDFSHL
DSLKAHLSIHTGEKPYACEYCTKSFTRLADMKTHIMRMHTNEKPFKCHLCNKSYARNTYL
TSHLRVHAKEKPFKCNFCIKSFTDQGHLNTHLRRHTGEKPFKCMVCEKAFSQVISVKRHM
AVHTGEKPFKCNLCDKTFAQQGNLKTHMLSHCSEKVFKCKTCDESFFKFTHLKEHMIKIH
SIDKPYECEECGRSFVRKSHLARHLAVHSKEKKKHKCTLVVDVSNM
Nucleotide sequence
Length: 1,401
>Harore.CG.MTP2014.S58.g08646.01.t
ATGAGGTACTACTGCAAGCGTTGCAGAAGAAAATTCACCAAGCCACATAGTTACGAAAGA
CACGTCGAGAAACATAAAATCACTAAAGTGTTATGTTACAAGATCAAATCGTCTGTTCGA
AAATGCATTCATACTGAGCGTACGGATTTCAAAAAAACACGGGAAAAGACGAAGGCTAGA
GATTACCAGATAAATCTGGAAAATTACCACATCAATAACGAATATCCAATAGGTTCGTTG
AATTTCATCGATAATAAACCATTCATCTGTGCTGTATGTAACAAGACTTTCTCATATGCC
CGAAATATAAGGAGACACATGAAAATTCACACTGATGAGAAGGAATTCGGGTGTATGATA
TGCAACAAAGAATTTCTCCATAAAGTAGATTTAAAAAGACACATGAAAACTCATACCGGT
GAAAAACCATTCAAATGCGAGATTTGCTACAAGATGTTCGCAACCAATGGAAATCTTTCC
AGTCATTTGAAAGTCCACATGAAGTCGGAGCTGTCTTACTGCCCCATATGCAATAAAGCC
TTCACTCGGGAAGACAGTATTAAGAAGCACATGATACTGCACACCGGAGAAAAGCCATAC
GAGTGCAAAAGTTGCGGGAAAAGATTCGCTCACGGGAGTGCGCTCACCCGACACAACAGA
ATTCATACAAAAGAAAAACCTTACTGTTGCCAGTACTGCCATAAAGATTTCTCCCATCTC
GACAGCTTAAAGGCACACTTGTCGATACATACCGGGGAGAAGCCGTATGCTTGCGAATAC
TGCACTAAATCATTTACGAGACTTGCTGACATGAAGACGCACATCATGAGGATGCACACG
AACGAAAAACCTTTTAAATGTCATCTCTGCAACAAGTCATACGCGAGGAACACCTACTTG
ACGTCGCATTTACGTGTCCATGCTAAAGAGAAACCCTTTAAATGTAATTTCTGCATCAAA
TCCTTTACAGATCAGGGTCATTTGAATACCCACCTGAGGAGACACACCGGTGAGAAACCT
TTCAAATGCATGGTGTGCGAGAAAGCGTTCTCTCAGGTTATTTCCGTGAAGAGACACATG
GCGGTTCACACTGGTGAGAAGCCGTTCAAGTGCAATCTATGCGACAAAACTTTTGCACAG
CAAGGGAATCTAAAAACTCACATGCTGAGTCATTGTAGTGAGAAAGTGTTCAAATGCAAA
ACCTGTGACGAGTCATTTTTCAAATTCACACACTTGAAAGAACACATGATAAAAATACAT
TCTATCGATAAACCATATGAATGCGAAGAATGTGGGAGGTCTTTTGTGAGAAAAAGTCAT
CTGGCAAGGCATTTAGCAGTTCATTCCAAAGAGAAAAAAAAGCATAAATGTACTTTAGTC
GTAGATGTTTCAAATATGTAA
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[3-30] 9.536 - T[88-115] 14.108 - T[116-143] 15.521 - T[144-171] 11.344 - T[172-199] 14.191 - T[200-227] 16.893 - T[228-255] 14.794 - T[256-284] 14.212 - T[285-312] 14.794 - T[313-340] 15.687 - T[341-368] 14.96 - T[369-396] 12.965 - T[397-425] 12.778 - T[426-453] 15.75 |
| SMART |
Znf_C2H2_type (IPR013087) - T[3-25] 1.7 - T[88-110] 7.1E-4 - T[116-138] 0.0021 - T[144-166] 0.0042 - T[172-194] 0.03 - T[200-222] 0.0071 - T[228-250] 0.23 - T[256-279] 0.0022 - T[285-307] 0.0088 - T[313-335] 9.3E-4 - T[341-363] 0.0018 - T[369-391] 6.3E-5 - T[397-420] 0.02 - T[426-448] 1.7E-4 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[5-25] . - T[90-110] . - T[118-138] . - T[146-166] . - T[174-194] . - T[202-222] . - T[229-250] . - T[258-279] . - T[287-307] . - T[315-335] . - T[343-363] . - T[371-391] . - T[399-420] . - T[428-448] . |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[84-144] 3.34E-17 - T[138-190] 7.85E-14 - T[180-237] 1.15E-18 - T[237-294] 4.8E-19 - T[294-350] 5.67E-18 - T[335-387] 1.15E-19 - T[395-448] 8.99E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN665_HUMAN | 43.467 % | 328 | 2.91E-106 |
| ZN235_HUMAN | 43.767 % | 337 | 3.15E-108 |
| ZFP2_HUMAN | 44.022 % | 327 | 5.69E-108 |
